Gene Information

Name : Svir_39050 (Svir_39050)
Accession : YP_003135674.1
Strain : Saccharomonospora viridis DSM 43017
Genome accession: NC_013159
Putative virulence/resistance : Unknown
Product : putative xylanase/chitin deacetylase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0726
EC number : -
Position : 4225680 - 4226567 bp
Length : 888 bp
Strand : -
Note : PFAM: Polysaccharide deacetylase

DNA sequence :
ATGGCCAAGGAGATCTTCGTCGCGTTCGGTGTCGACGTCGACGCGGTCGGCGGATGGCTCGGTTCCTACGGTGGTGAGGA
CTCCCCGTGCGACATCTCTCGCGGTCTGTTCGCAGGGGAGGTCGGTGTCCCCCGGATGCTCGAACTCTTCCGCAGGGCCG
AAATACCCACGACGTGGTTCTGGCCGGGGCATTCCATCGAAACCTTTCCCGAACAATTCGACGCCTGTGTGGCGGCGGGT
CACGAGATCGGGGTGCACGGTTACAGTCACGAGAACCCCATAGCGATGAGTCGGGAGCAGGAATCCGCGATCCTGGACCA
TTGCATTTCATTGATCACCGAGCGGACCGGGAGGCGTCCCACCGGGTATGTCGCACCGTGGTGGGAATTCTCACCGGTGA
CCAACGAATTGTTGCTCGAACGCGGCATCAAATACGACCACTCGCTGATGCACCGTGATTTCGAGCCCTATTATCTGCGG
GTCGGTGACTCCTGGTCGAAAATCGACTACGAACAGCCGGCCGAAACGTGGATGAAACCTCTGGAAAGGGGAGAGGAAAC
GGACCTGATCGAGATACCCGCATCGTGGTATCTCGACGATCTCCCGCCGATGATGTTCATCAAGGCCAACCCGAACAGTC
ACGGCTTCGTCAATCCGCGCGATCTCGAAATACTGTGGCGGGACCAATTCGATTGGGTGTACCGGGAATGCGAGTACGCG
GTGTTCGCGGTCACGGTGCATCCGGATGTGTCCGGACGCCCGCAGAACCTGCTCATGCTGGAGCGGTTGTTCGGACACAT
CCGCAGCCACGACGGTGTTCGTTGGGCCACGTTCGACCAGATCGCCGACGACTTCCGGCAGCGTAGACCCCGGAATCCGG
CGTCCTGA

Protein sequence :
MAKEIFVAFGVDVDAVGGWLGSYGGEDSPCDISRGLFAGEVGVPRMLELFRRAEIPTTWFWPGHSIETFPEQFDACVAAG
HEIGVHGYSHENPIAMSREQESAILDHCISLITERTGRRPTGYVAPWWEFSPVTNELLLERGIKYDHSLMHRDFEPYYLR
VGDSWSKIDYEQPAETWMKPLERGEETDLIEIPASWYLDDLPPMMFIKANPNSHGFVNPRDLEILWRDQFDWVYRECEYA
VFAVTVHPDVSGRPQNLLMLERLFGHIRSHDGVRWATFDQIADDFRQRRPRNPAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAB46604.1 hypothetical protein Not tested HPI Protein 8e-103 74