Gene Information

Name : Svir_39000 (Svir_39000)
Accession : YP_003135669.1
Strain : Saccharomonospora viridis DSM 43017
Genome accession: NC_013159
Putative virulence/resistance : Unknown
Product : daunorubicin resistance ABC transporter ATP-binding subunit
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 4220204 - 4221172 bp
Length : 969 bp
Strand : +
Note : PFAM: ABC transporter; TIGRFAM: daunorubicin resistance ABC transporter ATP-binding subunit

DNA sequence :
ATGGACGAACAGGTCGCGGTCCGGGCCCGTGGCCTCGTCAAAAGCTACGGTTCCACGCAAGCATTGAACGGGGTCGATCT
CGACGTCCTCTCAGGCCGAGTCCTCGGTCTGCTCGGCCCCAACGGCGCGGGCAAGACCACGGTCGTGCGCATCCTCACCA
CCCTGCTCCGCCCGGACGCCGGTGAAGCGTCGGTAGCGGGACACGACGTACTCACCGAACCCGACGCCGTACGCGCGGCC
ATCGGGGTGTCCGGGCAGTACGCCGCCGTGGACGAGAACCTCACCGGGTTCGAGAACCTCTACATGATCGGCAGGCTCTA
CGGGCTGAGTAAGCGGCACGCCAAACAGCGTTCACGCGAACTGCTGAAACGGTTCCAGCTCGCCGAGGCCGCGGATCGGA
CCGCCAGGGGGTACTCCGGCGGTATGCGCCGACGACTCGACCTCGCCGGAGCCCTGGTGGCCGAGCCGAAAGTCGTCGTC
CTGGACGAGCCCACGACAGGCCTGGACCCGCGCGGCAGGCTCGAGATGTGGCAGGTCATCGAACAGCTCGTGGCCACCGG
AGCCACCGTCCTGCTCACCACCCAGTACCTCGAAGAGGCCGACCGGCTCGCCGACTCCATCGTCGTCATCGACAAAGGCG
TGGTCATCGCGCGCGGCACCGCCGAGGAACTGAAACAGCGCATCGGCGGTGAACGACTCGAACTCGTCCTCGAGGACGCG
GCGGACGTGCCTCGTGCCGTGCGGATACTCGAAGAGGTCGGCACCAGCGAACCGGTCGTGGAAGAACCCATCCGCACGGT
GACGGTGTCCGTCGACGCGGGCGCGAAGGCCCTGGTGCAAGCACTGCGCAAACTCGACGCACAACACCTCGCCCTCCAGG
ACGTGGCACTGCGCCGTCCCACGCTCGACGACGTCTTCCTGGCACTCACCGGACGCGCCACCGCCACCGACGAGGAGACG
ACATCATGA

Protein sequence :
MDEQVAVRARGLVKSYGSTQALNGVDLDVLSGRVLGLLGPNGAGKTTVVRILTTLLRPDAGEASVAGHDVLTEPDAVRAA
IGVSGQYAAVDENLTGFENLYMIGRLYGLSKRHAKQRSRELLKRFQLAEAADRTARGYSGGMRRRLDLAGALVAEPKVVV
LDEPTTGLDPRGRLEMWQVIEQLVATGATVLLTTQYLEEADRLADSIVVIDKGVVIARGTAEELKQRIGGERLELVLEDA
ADVPRAVRILEEVGTSEPVVEEPIRTVTVSVDAGAKALVQALRKLDAQHLALQDVALRRPTLDDVFLALTGRATATDEET
TS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDC7B_2054 YP_005163495.1 methionine import ATP-binding protein Not tested Not named Protein 5e-48 46
CDCE8392_1976 YP_005134507.1 methionine import ATP-binding protein Not tested Not named Protein 5e-48 46