Gene Information

Name : Svir_38630 (Svir_38630)
Accession : YP_003135634.1
Strain : Saccharomonospora viridis DSM 43017
Genome accession: NC_013159
Putative virulence/resistance : Resistance
Product : cation/cationic drug transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2076
EC number : -
Position : 4181461 - 4181787 bp
Length : 327 bp
Strand : -
Note : PFAM: Small Multidrug Resistance protein

DNA sequence :
ATGAACGTTTACGTCCTGTTGGCGGCCGCGATCGCCGTCGAGGTGACCGGCACGGTGTCGCTGAAGTACACCGACGGTTT
CACCAAGCTGCTGCCCTCGGCTTTGGTGATCGTCAGCTACGGGACGGCCTTCTACCTGATGTCGCGCATCCTGAAACTGG
GGATGCCGGTCGGCGTCGTCTACGCCATCTGGTCGGCCGCCGGTGTCGCGTTGGTGGCCCTGATCGGGACTCTGTTCCTC
GGTGAGCGGATGAACCCGACCATGATCCTCGGGCTCATCCTCGTCATCAGTGGAGTGGTTCTCCTGGAACTGGGAGGGGA
GCATTGA

Protein sequence :
MNVYVLLAAAIAVEVTGTVSLKYTDGFTKLLPSALVIVSYGTAFYLMSRILKLGMPVGVVYAIWSAAGVALVALIGTLFL
GERMNPTMILGLILVISGVVLLELGGEH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
qacEdelta1 AGF35028.1 QacEdelta1 Not tested SGI1 Protein 3e-14 47
qacEdelta1 CAJ77052.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 3e-14 47
ebr YP_006098377.1 putative ethidium bromide resistance protein Not tested Tn2411 Protein 4e-14 47
qacEdelta1 AGK07109.1 QacEdelta1 Not tested SGI1 Protein 3e-14 47
qacEdelta1 AGF35063.1 QacEdelta1 Not tested SGI1 Protein 3e-14 47
qacEdelta1 CAJ77088.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 3e-14 47
qacEdelta1 ACN81026.1 QacEdelta1 Not tested AbaR5 Protein 4e-14 47
qacEdelta1 AFV53123.1 QacEdelta1 multidrug exporter Not tested AbGRI2-1 Protein 3e-14 47
qacEdelta1 AGK06933.1 QacEdelta1 Not tested SGI1 Protein 3e-14 47
qacE-deltal ACF06159.1 quartenary ammonium compound resistance protein Not tested Tn5036-like Protein 3e-14 47
qacEdelta1 AAK02047.1 quaternary ammonium compound and disinfectant protein Not tested SGI1 Protein 3e-14 47
qacEdelta1 AGK36647.1 QacEdelta1 Not tested AbaR26 Protein 3e-14 47
qacEdelta1 AGK06970.1 QacEdelta1 Not tested SGI1 Protein 3e-14 47
qacE-delta1 ACY75523.1 QacE-delta1 Not tested Tn6060 Protein 3e-14 47
qacEdelta1 AAK02056.1 quaternary ammonium compound and disinfectant protein Not tested SGI1 Protein 3e-14 47
qacEdelta1 AGK06979.1 QacEdelta1 Not tested SGI1 Protein 3e-14 47
qacE-delta1 ACY75532.1 QacE-delta1 Not tested Tn6060 Protein 3e-14 47
qacEdelta1 ABB48428.1 QacEdelta1 Not tested SGI1 Protein 3e-14 47
qacEdelta1 AGK07016.1 QacEdelta1 Not tested SGI1 Protein 3e-14 47
qacE-delta1 AET25389.1 QacE-delta1 Not tested PAGI-2(C) Protein 3e-14 47
qacEdelta1 ABZ01839.1 QacEdelta1 Not tested SGI2 Protein 3e-14 47
ACICU_00227 YP_001844886.1 membrane transporter Not tested AbaR20 Protein 4e-14 47
qacEdelta1 AGK07074.1 QacEdelta1 Not tested SGI1 Protein 3e-14 47
qacE-delta1 AFG30112.1 QacE-delta1 Not tested PAGI-2 Protein 3e-14 47
qacEdelta1 CAJ77030.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 3e-14 47
qacEdelta1 YP_005797134.1 quaternary ammonium compound-resistance protein Not tested AbaR4e Protein 4e-14 47
qacEdelta1 AGF34989.1 QacEdelta1 Not tested SGI1 Protein 3e-14 47
qacEdelta1 CAJ77049.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 3e-14 47
qacEdelta1 YP_005797150.1 quaternary ammonium compound-resistance protein Not tested AbaR4e Protein 4e-14 47
qacEdelta1 AGK07100.1 QacEdelta1 Not tested SGI1 Protein 3e-14 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Svir_38630 YP_003135634.1 cation/cationic drug transporter BAC0322 Protein 1e-14 47
Svir_38630 YP_003135634.1 cation/cationic drug transporter NC_010410.6003348.p0 Protein 6e-13 47
Svir_38630 YP_003135634.1 cation/cationic drug transporter BAC0002 Protein 6e-13 47
Svir_38630 YP_003135634.1 cation/cationic drug transporter BAC0323 Protein 1e-14 47
Svir_38630 YP_003135634.1 cation/cationic drug transporter CP001138.1.gene1489. Protein 2e-14 45
Svir_38630 YP_003135634.1 cation/cationic drug transporter BAC0249 Protein 4e-11 44
Svir_38630 YP_003135634.1 cation/cationic drug transporter AE000516.2.gene3301. Protein 4e-11 44
Svir_38630 YP_003135634.1 cation/cationic drug transporter BAC0324 Protein 6e-14 44
Svir_38630 YP_003135634.1 cation/cationic drug transporter BAC0139 Protein 6e-11 42
Svir_38630 YP_003135634.1 cation/cationic drug transporter NC_002695.1.913273.p Protein 1e-14 42
Svir_38630 YP_003135634.1 cation/cationic drug transporter BAC0150 Protein 1e-14 42
Svir_38630 YP_003135634.1 cation/cationic drug transporter BAC0377 Protein 2e-12 42