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Name : Svir_34570 (Svir_34570) Accession : YP_003135247.1 Strain : Saccharomonospora viridis DSM 43017 Genome accession: NC_013159 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 3761307 - 3762953 bp Length : 1647 bp Strand : + Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : TTGCACGGTGCCGACCGGGAGACCTCCGACGTCAAGCCCACCGTCACCACCGGTCCGATCACCGGTTCCCGCAAGGTCTA TCTCGAAACCGAGTCAGGACTTCGGGTCCCCGTTCGACGCATCGAGCTGTCGAACGGGGAGCATTTCGACGTCTACGACA CCTCCGGCCCCTACACCGATCCACAGGCCACAATAGACGTCCACAAAGGACTACCTAAACTGCGGGCCCCGTGGATCGAA GGCCGGGAGCACAAGACCCAGCTCGGCTGGGCGAAAGCCGGGGTCATCACCCCGGAGATGGAGTTCATCGCCGCACGGGA ACGCGTCGACCCCGAGTTCGTCCGTTCCGAGGTGGCCCGCGGACGGGCGGTCATCCCCGCCAACCGCAACCACCCCGAGT CCGAGCCGATGATCATCGGCAAGAACTTCCTCGTCAAGGTCAACGCCAACATGGGCAACTCCGCCGTGTGGTCGTCGGTG GAGGAGGAGGTCGACAAGATGGTGTGGGCCACCCGTTGGGGTGCCGACACCGTCATGGACCTGTCCACGGGCAAACGTAT CCACGAGACCCGCGAGTGGATCCTGCGCAACTCCCCCGTCCCCGTCGGGACCGTGCCGATCTACCAGGCGCTGGAGAAGG TCGGCGGTGATCCGACGAAGCTGTCGTGGGAGGTCTACCGCGACACCGTGATCGAGCAGTGCGAGCAGGGTGTCGACTAC ATGACCGTCCATGCGGGAGTGTTGCTCCGGTATGTGCCGCTGACCGCCAACCGGGTCACCGGCATCGTCTCCCGCGGCGG TTCGATCATGGCCGCGTGGTGCCTGGCACACCACAAGGAATCGTTCCTCTACACGCATTTCGAGGAACTGTGCGACATCC TCCGCGAATACGACGTGACCTTCTCCCTCGGCGACGGCCTGCGCCCGGGCTCCATCGCCGACGCCAACGACCGCGCCCAG TTCGCCGAGCTGGAGACGTTGGGCGAACTCACCCGCATCGCACGGGAACGCGACGTGCAGGTGATGATCGAAGGCCCGGG GCACGTGCCCATGCACAAGATCAAGGAGAACGTGGAACGGCAGGAGCGGCTCTGCGACGAGGCGCCGTTCTACACGCTCG GCCCCCTGGCCACCGACATCGCACCGGCCTACGACCACATCACGTCGGCCATCGGGGCGGCGCAGATCGCCTGGTACGGC ACGGCGATGCTGTGTTACGTCACGCCGAAGGAACACCTCGGTCTGCCCAACCGGGACGACGTGAAGACCGGTGTCATCTC GTACAAGATCGCCGCACACGCCGCCGACCTCGCCAAGGGCCACCCGTACGCGCAGGAGTGGGACGACGCGTTGTCGAAGG CCCGGTTCGAGTTCCGCTGGAACGACCAGTTCAACCTCTCCCTGGACCCGGACACCGCGCGTTCGTTCCATGACGAGACG CTGCCCGCGGAACCGGCCAAGACGGCGCACTTCTGCTCCATGTGCGGGCCGAAGTTCTGTTCCATGCGCATCACCCAGGA CGTTCGTGCCTACGCCGAGGAACACGGCCTGACGAGTGTCGAGGCCATCGAGGCGGGCATGCGGGAGAAGTCCCGCGAGT TCACCGAGAAGGGCGGACAGGTGTATCTACCGGTGGTGGACCGATGA Protein sequence : MHGADRETSDVKPTVTTGPITGSRKVYLETESGLRVPVRRIELSNGEHFDVYDTSGPYTDPQATIDVHKGLPKLRAPWIE GREHKTQLGWAKAGVITPEMEFIAARERVDPEFVRSEVARGRAVIPANRNHPESEPMIIGKNFLVKVNANMGNSAVWSSV EEEVDKMVWATRWGADTVMDLSTGKRIHETREWILRNSPVPVGTVPIYQALEKVGGDPTKLSWEVYRDTVIEQCEQGVDY MTVHAGVLLRYVPLTANRVTGIVSRGGSIMAAWCLAHHKESFLYTHFEELCDILREYDVTFSLGDGLRPGSIADANDRAQ FAELETLGELTRIARERDVQVMIEGPGHVPMHKIKENVERQERLCDEAPFYTLGPLATDIAPAYDHITSAIGAAQIAWYG TAMLCYVTPKEHLGLPNRDDVKTGVISYKIAAHAADLAKGHPYAQEWDDALSKARFEFRWNDQFNLSLDPDTARSFHDET LPAEPAKTAHFCSMCGPKFCSMRITQDVRAYAEEHGLTSVEAIEAGMREKSREFTEKGGQVYLPVVDR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 2e-177 | 64 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 2e-177 | 64 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 9e-167 | 60 |
