Gene Information

Name : Svir_00330 (Svir_00330)
Accession : YP_003131950.1
Strain : Saccharomonospora viridis DSM 43017
Genome accession: NC_013159
Putative virulence/resistance : Unknown
Product : daunorubicin resistance ABC transporter ATP-binding subunit
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 27936 - 28871 bp
Length : 936 bp
Strand : +
Note : PFAM: ABC transporter; TIGRFAM: daunorubicin resistance ABC transporter ATP-binding subunit

DNA sequence :
GTGGTCATGTCACCTCCGGCGATCGAGGCCCGAGGGATTCACAAGACATTCGGGAAGCGTCCGGTCCTGACCGGACTCGA
CCTGGACGTCCCCGCGGGCACGCTGCTTGCCCTGCTCGGGCCGAACGGATCCGGCAAGACGACCACCGTCCGTATCCTCA
CGACGCTGTTGCGCCCGGACAGCGGCACTGTCCGCGTGGGTGGTCACGACGCCTTCACTGAACCGGCGGCCGTCCGCCGC
GCCATCGGCCTCACCGCGCAGCAGGCCAGCGTGGACGAGCTGTTGACCGGGCGGGAGAACCTCGAACTGTTCGCCGGTCT
GAACCACCTGGGGAGGAGGGAATCCCGCCGTCGAGCGGCCGAACTGCTCGAACGGTTTCGACTCACGGACGCCGCCGACC
GCAGGGCGGGTGACTACTCCGGAGGCATGCGGCGCCGTCTCGATTTGGCCGTGAGCATGGTCGCCGAGCCCCGCATCCTG
TTCCTCGACGAGCCCACCACCGGGCTCGACCCGCGTAGCCGAGCGGATCTTTGGGGCGTCATCCGCCAGCTGGTCGATAC
CGGGACGACGGTCCTGCTGACCACGCAGTACCTCGAGGAAGCCGATCGACTCGCCGACCGCGTCGCCATCATCGGTGGCG
GTCGTGTCGTGGAGGAGGACACCCCCGAGGGGCTCAAACACCGCATCGGCACGGAACGGCTGCGCGTCACCTTCGCCCGA
CCACTGGAGACGTCGACCGCGGTCGCGCTCCACCCCGGTGCGCACCCCGACCCCGAAAACAGCGGAGTGGTGGTCCCGTT
ACGTGGACCGGACCATCTGCGGCAGGTGCTCAACGACTTCCACCGAGCTGATTTGTCGGTGACCTCGGTGTCGCTGTCGG
CCCCCACGCTCGACGACGTGTTCTTCCACCTGACCGACGAGGAGGTCGCGGTATGA

Protein sequence :
MVMSPPAIEARGIHKTFGKRPVLTGLDLDVPAGTLLALLGPNGSGKTTTVRILTTLLRPDSGTVRVGGHDAFTEPAAVRR
AIGLTAQQASVDELLTGRENLELFAGLNHLGRRESRRRAAELLERFRLTDAADRRAGDYSGGMRRRLDLAVSMVAEPRIL
FLDEPTTGLDPRSRADLWGVIRQLVDTGTTVLLTTQYLEEADRLADRVAIIGGGRVVEEDTPEGLKHRIGTERLRVTFAR
PLETSTAVALHPGAHPDPENSGVVVPLRGPDHLRQVLNDFHRADLSVTSVSLSAPTLDDVFFHLTDEEVAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDC7B_2054 YP_005163495.1 methionine import ATP-binding protein Not tested Not named Protein 3e-41 48
CDCE8392_1976 YP_005134507.1 methionine import ATP-binding protein Not tested Not named Protein 3e-41 48