|
Name : Svir_31270 (Svir_31270) Accession : YP_003134929.1 Strain : Saccharomonospora viridis DSM 43017 Genome accession: NC_013159 Putative virulence/resistance : Virulence Product : response regulator with CheY-like receiver domain-containing protein and winged-helix DNA-binding domain-containing protein Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 3394015 - 3394680 bp Length : 666 bp Strand : - Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal DNA sequence : ATGAGCCGCATCCTGGTCGCGGAGGACGAACCCCGCATCGCCGCGTTCGTCAACAAAGGGCTCACCGCCAACGGGTTCAC GGTGACGGTGGTGGAGGACGGCCAGGCCGCCTACGAGTACGCGCTCACAGGGTCGTTCGACCTCATGGTGCTCGACATCG GCCTACCGGGTATGGACGGCTTCACGGTGCTGCGCAAGCTCCGGGCCGAACGTTGTCCGATCCCCGTGATCATCCTGACG GCGCGGGACAGCGTGCAGGACACGGTGGCGGGCCTGGAGGGCGGTGCCGACGACTACATGCCCAAGCCGTTCCGGTTCGA GGAACTGTTGGCCCGGGTGCGGCTGCGGCTGGTGTCCGACCGTTCCCAGGAACCGACCGTGCTCACCTACGGCGGGCTGC AATTGGACCTGCGGACGCGACGTGCGCACGTGGGCGGCGAGACGGTGGATCTGTCGGCTCGGGAGTTCGCGCTCGCCGAG ACGTTCCTGCGGCACCCGGGGCAGGTGTTGTCCCGGGAACAGTTGCTCAGCCAGGTGTGGGGCTACGACTTCGATCCCGG TTCCAACGTCGTCGACGTCTACGTCCGTTACCTGCGTCGGAAGCTCGGCGCCGACCGGATCACCACCGTGCGGGGCATGG GCTACCGCCTGGAAGAACGTGACTGA Protein sequence : MSRILVAEDEPRIAAFVNKGLTANGFTVTVVEDGQAAYEYALTGSFDLMVLDIGLPGMDGFTVLRKLRAERCPIPVIILT ARDSVQDTVAGLEGGADDYMPKPFRFEELLARVRLRLVSDRSQEPTVLTYGGLQLDLRTRRAHVGGETVDLSAREFALAE TFLRHPGQVLSREQLLSQVWGYDFDPGSNVVDVYVRYLRRKLGADRITTVRGMGYRLEERD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| copR | NP_460069.2 | transcriptional regulatory protein YedW | Not tested | SPI-5 | Protein | 2e-30 | 44 |
| copR | AAC33719.1 | regulatory protein CopR | Not tested | SPI-5 | Protein | 7e-30 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Svir_31270 | YP_003134929.1 | response regulator with CheY-like receiver domain-containing protein and winged-helix DNA-binding domain-containing protein | BAC0083 | Protein | 3e-39 | 49 |
| Svir_31270 | YP_003134929.1 | response regulator with CheY-like receiver domain-containing protein and winged-helix DNA-binding domain-containing protein | BAC0197 | Protein | 8e-37 | 49 |
| Svir_31270 | YP_003134929.1 | response regulator with CheY-like receiver domain-containing protein and winged-helix DNA-binding domain-containing protein | BAC0125 | Protein | 1e-34 | 45 |
| Svir_31270 | YP_003134929.1 | response regulator with CheY-like receiver domain-containing protein and winged-helix DNA-binding domain-containing protein | BAC0638 | Protein | 7e-33 | 45 |
| Svir_31270 | YP_003134929.1 | response regulator with CheY-like receiver domain-containing protein and winged-helix DNA-binding domain-containing protein | BAC0308 | Protein | 7e-32 | 42 |
| Svir_31270 | YP_003134929.1 | response regulator with CheY-like receiver domain-containing protein and winged-helix DNA-binding domain-containing protein | NC_002952.2859858.p0 | Protein | 5e-31 | 41 |
| Svir_31270 | YP_003134929.1 | response regulator with CheY-like receiver domain-containing protein and winged-helix DNA-binding domain-containing protein | NC_007622.3794948.p0 | Protein | 5e-31 | 41 |
| Svir_31270 | YP_003134929.1 | response regulator with CheY-like receiver domain-containing protein and winged-helix DNA-binding domain-containing protein | AE015929.1.gene1106. | Protein | 3e-28 | 41 |
| Svir_31270 | YP_003134929.1 | response regulator with CheY-like receiver domain-containing protein and winged-helix DNA-binding domain-containing protein | NC_003923.1003417.p0 | Protein | 5e-31 | 41 |
| Svir_31270 | YP_003134929.1 | response regulator with CheY-like receiver domain-containing protein and winged-helix DNA-binding domain-containing protein | NC_013450.8614146.p0 | Protein | 5e-31 | 41 |
| Svir_31270 | YP_003134929.1 | response regulator with CheY-like receiver domain-containing protein and winged-helix DNA-binding domain-containing protein | NC_002951.3238224.p0 | Protein | 5e-31 | 41 |
| Svir_31270 | YP_003134929.1 | response regulator with CheY-like receiver domain-containing protein and winged-helix DNA-binding domain-containing protein | NC_007793.3914065.p0 | Protein | 5e-31 | 41 |
| Svir_31270 | YP_003134929.1 | response regulator with CheY-like receiver domain-containing protein and winged-helix DNA-binding domain-containing protein | NC_002758.1121390.p0 | Protein | 5e-31 | 41 |
| Svir_31270 | YP_003134929.1 | response regulator with CheY-like receiver domain-containing protein and winged-helix DNA-binding domain-containing protein | NC_010079.5776364.p0 | Protein | 5e-31 | 41 |
| Svir_31270 | YP_003134929.1 | response regulator with CheY-like receiver domain-containing protein and winged-helix DNA-binding domain-containing protein | NC_002516.2.879194.p | Protein | 8e-23 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Svir_31270 | YP_003134929.1 | response regulator with CheY-like receiver domain-containing protein and winged-helix DNA-binding domain-containing protein | VFG1389 | Protein | 8e-33 | 45 |
| Svir_31270 | YP_003134929.1 | response regulator with CheY-like receiver domain-containing protein and winged-helix DNA-binding domain-containing protein | VFG0596 | Protein | 6e-31 | 44 |
| Svir_31270 | YP_003134929.1 | response regulator with CheY-like receiver domain-containing protein and winged-helix DNA-binding domain-containing protein | VFG1390 | Protein | 8e-33 | 42 |
