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Name : Svir_31110 (Svir_31110) Accession : YP_003134913.1 Strain : Saccharomonospora viridis DSM 43017 Genome accession: NC_013159 Putative virulence/resistance : Unknown Product : ATPase component of various ABC-type transport systems with duplicated ATPase domain-containing protein Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : - Position : 3375180 - 3376940 bp Length : 1761 bp Strand : + Note : PFAM: Oligopeptide/dipeptide transporter, C-terminal region; ABC transporter; TIGRFAM: phosphonate C-P lyase system protein PhnK DNA sequence : ATGTCGCCGCAAGCGGCGGATACGTCGTCGGAATCCGTGCTGTCCATATCGGACTTGAAGATCTCCTTCTCGACCGAGGA CGGCGTCGTCGAAGCGGTCAAGGGAATCGGTTTCGACGTCGCCCCCGGCGAGATTCTGGCGATCGTTGGTGAGTCCGGGT CGGGCAAGTCGGTCACCTCGATGTCGGTACCCGGCCTGTTGCCGAAGACCGCCCACATCCAGGGCGAGCGCAGATTGGGC GCGGTTGACCTGAGTCACATGACGTCCAAGGAGCTGCGCAAGCACCGCGGTAACGACGTCGCCATGATCTTCCAGGAGCC GATGACGGCTCTGAACCCCATGTACACGATCGGTTGGCAGGTCCGGGAAGCCCTGCTGGCCCACAAGGACATCTCCAAGC AGGCCGCCAACAAACGAGCCATCGAGCTGCTCGACATGGTCGGCATCCCCGAGCCGGAGAAACGCTTCAAGCAGTATCCG CACCAGCTCTCCGGCGGTCTGCGGCAGCGCGTGGTCATCGCCATCGCCATCGCGTGCGACCCCAAGGTCATCATCGCCGA CGAACCCACCACGGCGCTCGACGTGACGGTACAGGCGGAGATCCTGGCCCTGTTGCGCAAACTGCGCGACACCCTCAACA CCGCGATCGTGCTCATCACCCACGACATGGGCGTCGTGGCCGACCTGGCCGACCGCGTGGTGGTGATGTACCAGGGCGAA ATCGTCGAGCAGGCCCCGGTGCACGAGCTGTTCAACAATCCGCAGCAAGAGTACACCAAGCGCCTGCTGGCCGCCGTTCC CGTGCTCGGCCAACGTCCCGAGGGGCGGCGGCTGTTGGACACCCCGAAGGTCGAGGTCGTCGAGAGCAAGACCGACGAGG CGATCCGCAAGGCACACGAGGAACTGAAGCCGTACATCGACGACAGCGCCCCTGCGCTGAAGATCGAGAACCTCGTGCTG GAGTACCCCGGGAAGGGCCGGCAGGGGAAGAACCGCGCGGTCGACGACGTCTCGCTGCACATCGAACGAGGCGAGATCCT CGGCCTGGTCGGCGAATCGGGTTCCGGTAAGTCGACGGTCGGTCGCTGCGCCATTCGGCTGTTGAAACCCACCTCGGGCA CCGTTTCCATCGCGGGCACCGACATCACCACGATGTCGCACAAGAAGCTGCGTCCGCTGCGTCGGTACTTCTCGATCGTC TTCCAGGACCCGGCATCCACTCTGGACCCGAAGATGACCATCGGTGAGTCGATCGCCGAACCGTTGGTCCTGCACAAGAT CCTGTCGGGCAAGGAACTGACCGACCGGGTCACCGATCTGCTCGACAAGGTGCAGCTGTCTGGTCACTACCGCAACCGCT ACCCGCACGAGTTGTCCGGTGGACAGCGGCAGCGGATCGCCATCGCCCGCGCGCTCGCACTGAACCCCAAGCTGCTCATC GCCGACGAACCCACCTCGGCGCTCGACGTGTCGGTGCAGGCGAAGATCCTCGACCTGTTCCTCGACCTGCAGCAGCATCT ACAGTTCGCGTGCCTGTTCATCAGCCATGACCTCGCCGTCGTGGACCTCCTCGCCGACCGCGTCGCCGTGATGCAGCGGG GCAAGCTCGTCGAGGTGGGTACCCGCGAACAAGTGCTGCACGCACCGCAGCAGGAGTACACGAAGCGCCTGCTGTCCGCC GCACCGGTGGCCGACCCGGTGCTCCAGGCCGAACGCAGGCGCGCGTGGGAGGAAGGCCGCGTGGCGCCGGTCAAGGACTG A Protein sequence : MSPQAADTSSESVLSISDLKISFSTEDGVVEAVKGIGFDVAPGEILAIVGESGSGKSVTSMSVPGLLPKTAHIQGERRLG AVDLSHMTSKELRKHRGNDVAMIFQEPMTALNPMYTIGWQVREALLAHKDISKQAANKRAIELLDMVGIPEPEKRFKQYP HQLSGGLRQRVVIAIAIACDPKVIIADEPTTALDVTVQAEILALLRKLRDTLNTAIVLITHDMGVVADLADRVVVMYQGE IVEQAPVHELFNNPQQEYTKRLLAAVPVLGQRPEGRRLLDTPKVEVVESKTDEAIRKAHEELKPYIDDSAPALKIENLVL EYPGKGRQGKNRAVDDVSLHIERGEILGLVGESGSGKSTVGRCAIRLLKPTSGTVSIAGTDITTMSHKKLRPLRRYFSIV FQDPASTLDPKMTIGESIAEPLVLHKILSGKELTDRVTDLLDKVQLSGHYRNRYPHELSGGQRQRIAIARALALNPKLLI ADEPTSALDVSVQAKILDLFLDLQQHLQFACLFISHDLAVVDLLADRVAVMQRGKLVEVGTREQVLHAPQQEYTKRLLSA APVADPVLQAERRRAWEEGRVAPVKD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 3e-92 | 44 |
