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Name : Svir_30940 (Svir_30940) Accession : YP_003134896.1 Strain : Saccharomonospora viridis DSM 43017 Genome accession: NC_013159 Putative virulence/resistance : Virulence Product : response regulator with CheY-like receiver domain-containing protein and winged-helix DNA-binding domain-containing protein Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 3357943 - 3358620 bp Length : 678 bp Strand : - Note : PFAM: Transcriptional regulatory protein, C terminal; Response regulator receiver domain DNA sequence : ATGAAGGCGCGTGTGCTGGTCGTTGATGACGACCCCGCTCTGGCTGAAATGCTCACCATCGTGCTGCGCGGCGAGGGGTT CGACACCGCCGTGGTGTCCGATGGTTCTCGTGCACTGCCTGCGCTGCGCGAACTCAAACCCGACCTGGTCCTGCTCGACC TCATGCTGCCCGGCATGAACGGCATCGACGTCTGCAAGGCGATCCGAGCAGAATCCGGCGTGCCGATCGTGATGCTCACG GCGAAGAGCGACACCGTGGACATCGTGCTGGGTTTGGAGTCGGGCGCCGACGACTACGTCGTCAAGCCGTTCAAACCGAA GGAACTCGTCGCGCGGGTGCGGGCGCGGTTGCGGCGCACCGAGTCCGAGCCCGCCGAGACGCTCACCATCGGTGACCTCA CCATCGACGTGCCGGGGCACGAGGTCACGAGGGACGGCAAGGCCATCCCCCTAACCCCGTTGGAGTTCGACCTGCTCGTG GCACTGGCCCGCAAGCCGCGACAGGTCTTCACCCGTGAGGTCCTGCTCGAACAGGTCTGGGGTTATCGGCATGCGGCCGA TACGCGGCTGGTCAACGTGCACGTTCAGCGACTGCGGTCGAAGGTCGAGAAGGATCCTGAGCATCCCGAGGTCGTGCTGA CCGTCCGCGGCGTCGGTTACAAAGCGGGTCCCCCGTAA Protein sequence : MKARVLVVDDDPALAEMLTIVLRGEGFDTAVVSDGSRALPALRELKPDLVLLDLMLPGMNGIDVCKAIRAESGVPIVMLT AKSDTVDIVLGLESGADDYVVKPFKPKELVARVRARLRRTESEPAETLTIGDLTIDVPGHEVTRDGKAIPLTPLEFDLLV ALARKPRQVFTREVLLEQVWGYRHAADTRLVNVHVQRLRSKVEKDPEHPEVVLTVRGVGYKAGPP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| c3565 | NP_755440.1 | response regulator | Not tested | PAI I CFT073 | Protein | 2e-31 | 42 |
| unnamed | CAD42044.1 | hypothetical protein | Not tested | PAI II 536 | Protein | 4e-31 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Svir_30940 | YP_003134896.1 | response regulator with CheY-like receiver domain-containing protein and winged-helix DNA-binding domain-containing protein | AE000516.2.gene3505. | Protein | 9e-78 | 83 |
| Svir_30940 | YP_003134896.1 | response regulator with CheY-like receiver domain-containing protein and winged-helix DNA-binding domain-containing protein | NC_002952.2859905.p0 | Protein | 6e-38 | 46 |
| Svir_30940 | YP_003134896.1 | response regulator with CheY-like receiver domain-containing protein and winged-helix DNA-binding domain-containing protein | NC_009641.5332272.p0 | Protein | 6e-38 | 46 |
| Svir_30940 | YP_003134896.1 | response regulator with CheY-like receiver domain-containing protein and winged-helix DNA-binding domain-containing protein | NC_013450.8614421.p0 | Protein | 6e-38 | 46 |
| Svir_30940 | YP_003134896.1 | response regulator with CheY-like receiver domain-containing protein and winged-helix DNA-binding domain-containing protein | NC_007793.3914279.p0 | Protein | 6e-38 | 46 |
| Svir_30940 | YP_003134896.1 | response regulator with CheY-like receiver domain-containing protein and winged-helix DNA-binding domain-containing protein | NC_007622.3794472.p0 | Protein | 6e-38 | 46 |
| Svir_30940 | YP_003134896.1 | response regulator with CheY-like receiver domain-containing protein and winged-helix DNA-binding domain-containing protein | NC_002745.1124361.p0 | Protein | 6e-38 | 46 |
| Svir_30940 | YP_003134896.1 | response regulator with CheY-like receiver domain-containing protein and winged-helix DNA-binding domain-containing protein | NC_009782.5559369.p0 | Protein | 6e-38 | 46 |
| Svir_30940 | YP_003134896.1 | response regulator with CheY-like receiver domain-containing protein and winged-helix DNA-binding domain-containing protein | NC_002951.3237708.p0 | Protein | 6e-38 | 46 |
| Svir_30940 | YP_003134896.1 | response regulator with CheY-like receiver domain-containing protein and winged-helix DNA-binding domain-containing protein | NC_002758.1121668.p0 | Protein | 6e-38 | 46 |
| Svir_30940 | YP_003134896.1 | response regulator with CheY-like receiver domain-containing protein and winged-helix DNA-binding domain-containing protein | NC_003923.1003749.p0 | Protein | 5e-38 | 46 |
| Svir_30940 | YP_003134896.1 | response regulator with CheY-like receiver domain-containing protein and winged-helix DNA-binding domain-containing protein | BAC0125 | Protein | 2e-29 | 46 |
| Svir_30940 | YP_003134896.1 | response regulator with CheY-like receiver domain-containing protein and winged-helix DNA-binding domain-containing protein | NC_012469.1.7686381. | Protein | 1e-37 | 45 |
| Svir_30940 | YP_003134896.1 | response regulator with CheY-like receiver domain-containing protein and winged-helix DNA-binding domain-containing protein | NC_012469.1.7685629. | Protein | 1e-33 | 45 |
| Svir_30940 | YP_003134896.1 | response regulator with CheY-like receiver domain-containing protein and winged-helix DNA-binding domain-containing protein | HE999704.1.gene2815. | Protein | 2e-34 | 44 |
| Svir_30940 | YP_003134896.1 | response regulator with CheY-like receiver domain-containing protein and winged-helix DNA-binding domain-containing protein | CP000675.2.gene1535. | Protein | 5e-28 | 42 |
| Svir_30940 | YP_003134896.1 | response regulator with CheY-like receiver domain-containing protein and winged-helix DNA-binding domain-containing protein | BAC0197 | Protein | 1e-24 | 42 |
| Svir_30940 | YP_003134896.1 | response regulator with CheY-like receiver domain-containing protein and winged-helix DNA-binding domain-containing protein | BAC0039 | Protein | 2e-30 | 42 |
| Svir_30940 | YP_003134896.1 | response regulator with CheY-like receiver domain-containing protein and winged-helix DNA-binding domain-containing protein | CP001138.1.gene2239. | Protein | 2e-30 | 42 |
| Svir_30940 | YP_003134896.1 | response regulator with CheY-like receiver domain-containing protein and winged-helix DNA-binding domain-containing protein | CP000034.1.gene2186. | Protein | 2e-30 | 42 |
| Svir_30940 | YP_003134896.1 | response regulator with CheY-like receiver domain-containing protein and winged-helix DNA-binding domain-containing protein | CP001918.1.gene3444. | Protein | 3e-30 | 42 |
| Svir_30940 | YP_003134896.1 | response regulator with CheY-like receiver domain-containing protein and winged-helix DNA-binding domain-containing protein | BAC0596 | Protein | 2e-30 | 42 |
| Svir_30940 | YP_003134896.1 | response regulator with CheY-like receiver domain-containing protein and winged-helix DNA-binding domain-containing protein | AE015929.1.gene1106. | Protein | 1e-25 | 41 |
| Svir_30940 | YP_003134896.1 | response regulator with CheY-like receiver domain-containing protein and winged-helix DNA-binding domain-containing protein | BAC0111 | Protein | 7e-23 | 41 |
| Svir_30940 | YP_003134896.1 | response regulator with CheY-like receiver domain-containing protein and winged-helix DNA-binding domain-containing protein | AE016830.1.gene1681. | Protein | 8e-37 | 41 |
| Svir_30940 | YP_003134896.1 | response regulator with CheY-like receiver domain-containing protein and winged-helix DNA-binding domain-containing protein | BAC0533 | Protein | 1e-20 | 41 |
| Svir_30940 | YP_003134896.1 | response regulator with CheY-like receiver domain-containing protein and winged-helix DNA-binding domain-containing protein | CP000647.1.gene4257. | Protein | 1e-20 | 41 |
| Svir_30940 | YP_003134896.1 | response regulator with CheY-like receiver domain-containing protein and winged-helix DNA-binding domain-containing protein | AF155139.2.orf0.gene | Protein | 1e-27 | 41 |
| Svir_30940 | YP_003134896.1 | response regulator with CheY-like receiver domain-containing protein and winged-helix DNA-binding domain-containing protein | BAC0308 | Protein | 3e-23 | 41 |
| Svir_30940 | YP_003134896.1 | response regulator with CheY-like receiver domain-containing protein and winged-helix DNA-binding domain-containing protein | CP000647.1.gene2531. | Protein | 4e-30 | 41 |
| Svir_30940 | YP_003134896.1 | response regulator with CheY-like receiver domain-containing protein and winged-helix DNA-binding domain-containing protein | NC_002695.1.916589.p | Protein | 5e-30 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Svir_30940 | YP_003134896.1 | response regulator with CheY-like receiver domain-containing protein and winged-helix DNA-binding domain-containing protein | VFG1389 | Protein | 1e-25 | 46 |
| Svir_30940 | YP_003134896.1 | response regulator with CheY-like receiver domain-containing protein and winged-helix DNA-binding domain-containing protein | VFG1390 | Protein | 1e-28 | 43 |
| Svir_30940 | YP_003134896.1 | response regulator with CheY-like receiver domain-containing protein and winged-helix DNA-binding domain-containing protein | VFG1702 | Protein | 9e-32 | 42 |
| Svir_30940 | YP_003134896.1 | response regulator with CheY-like receiver domain-containing protein and winged-helix DNA-binding domain-containing protein | VFG1563 | Protein | 2e-31 | 41 |
