Gene Information

Name : hemC (Svir_02860)
Accession : YP_003132195.1
Strain : Saccharomonospora viridis DSM 43017
Genome accession: NC_013159
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : -
Position : 285048 - 285998 bp
Length : 951 bp
Strand : +
Note : transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis

DNA sequence :
GTGACTAACCCCAGTAGCAGGACCCTCCGGATCGGCACGCGTGCCAGCAATCTCGCGATGTCCCAGACCCGGACGATCGC
CAAGATGCTGGAGGAGGCCGGGCAGAAGGTCGAGCTCGTGCCCGTGTCGACGCCAGGGGACCGGTCCTCGGCGCCGATCG
CCGAGATCGGGGTCGGAGTGTTCACTTCGGCGCTGCGTGAGGCGTTGCTGGCCAACGAGGTCGACGTCGCCGTGCATTCC
TACAAGGACCTGCCCACCGCCCCGCAGCCCGGCATCGTGCTGGCCGCGGTCTCGAAGCGGGAGGACCCGAGGGATGTGCT
CATCTCCCGGGACGGACTCACCCTGGGTGAGTTGCCGCCCGGTGCGAAGGTGGGCACCGGCTCGCCGCGCCGGATGACGC
AGCTTCGGGCTCTCGGGCTCGGTTTGGAGATTGTGCCGATCCGAGGCAACATTGACACCCGCATCGCCAAGGTGACCTCC
GGTGAGCTCGACGCGATCGTGCTCGCCAAGGCGGGATTGACCCGGGTTGGCAAGCTCGACCTGATCACCGAGGTCATCGA
CCCGATGCAGATTCTGCCCGCACCCGCGCAGGGTGCGCTGGCTGTTGAGACCCGCGTCGACGACGTGGACACCGAACACC
TGCTTCGGTCCATTGTGGATCATGAAGCGACACGGGTGGCGGTTGCGGCCGAACGGGCGGTGCTCGCGACACTGCAAGCC
GGCTGCAGCGCACCCGTGGGCGCACTCGCCGAGGTCGTCGAGGATCTGGACAGCGAAGGGGCTGTGGTCGAACGTCTTTC
GCTGCGGGGCGTCGCCGCCACCGCGACGGAGGGCGACTCCGTGCAGATCCTCAGGGCGTCGGGGGTGGCCGACAAGCATG
AAGCCGACAGGCTCGGCCGCACGGTGGCTTCCGAGTTGCTCGACCTCGGTGCCGGTGCCCTGTCGCGCTGA

Protein sequence :
MTNPSSRTLRIGTRASNLAMSQTRTIAKMLEEAGQKVELVPVSTPGDRSSAPIAEIGVGVFTSALREALLANEVDVAVHS
YKDLPTAPQPGIVLAAVSKREDPRDVLISRDGLTLGELPPGAKVGTGSPRRMTQLRALGLGLEIVPIRGNIDTRIAKVTS
GELDAIVLAKAGLTRVGKLDLITEVIDPMQILPAPAQGALAVETRVDDVDTEHLLRSIVDHEATRVAVAAERAVLATLQA
GCSAPVGALAEVVEDLDSEGAVVERLSLRGVAATATEGDSVQILRASGVADKHEADRLGRTVASELLDLGAGALSR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 8e-35 41
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 8e-35 41