Gene Information

Name : Svir_27350 (Svir_27350)
Accession : YP_003134543.1
Strain : Saccharomonospora viridis DSM 43017
Genome accession: NC_013159
Putative virulence/resistance : Unknown
Product : pyridoxal phosphate enzyme, YggS family
Function : -
COG functional category : R : General function prediction only
COG ID : COG0325
EC number : -
Position : 2951408 - 2952142 bp
Length : 735 bp
Strand : -
Note : PFAM: Alanine racemase, N-terminal domain; TIGRFAM: pyridoxal phosphate enzyme, YggS family

DNA sequence : 
GTGAGCAGCCAGCGCTCGGAGGAATTGGCGACGGCGCTGCGGAAGATCACCGATCGTATCGAGCAGGCATGCCGACGGGT
CGGTCGTTCGCCGGACGAGGTCCGGCTCATCGCCGTGACGAAGACCTTCCCCGCCACCGACGCTGCCGCCCTGCTGGACC
TCGGGGTGCGTAACCTCGGGGAGAACCGGGATCAGGAAGCGGTGGCCAAGGTGCGCGAGGTGGGACAGCTTCGCCCGGAC
GCCGACGTGCGTTGGCACATGGTCGGCCGACTGCAGCGCAACAAGGCCAGGTCGGTGGCGCGCTGGGCCGCGGAGGTGCA
GTCGGTGGACTCCCTCCGACTGGCCGACGCGCTCACCAAGGCGGTGCGGGCGGCGCTGGAGGCCGGAGAGCGGGATCGGC
CGCTCGACGTGCTCGTCCAGGCCAGCCTCGACGACGATCCGTCGCGCGGCGGCTGCCCTATTGATGATCTTAGTGAGCTC
GCCGATGTGATCGCCCAAAGGGGTGATTATCTCCGATTGCGCGGCGTGATGGCCGTCGCGCCGCTCGGTGTCGACCCCGA
ACCGGCTTTCGAGCGGTTGGCGGCCGTGGCCGAGAGGTTGCGGAAGGATCACCCTGAGGCGACCGAGATCTCGGCGGGCA
TGAGCGGGGACTTGGACCAGGCAATCGCATACGGCTCGACGTGTGTGCGTGTCGGAACCGCGTTGCTCGGCGGTCGCGGT
TTAGCCTCCCCTTAG

Protein sequence : 
MSSQRSEELATALRKITDRIEQACRRVGRSPDEVRLIAVTKTFPATDAAALLDLGVRNLGENRDQEAVAKVREVGQLRPD
ADVRWHMVGRLQRNKARSVARWAAEVQSVDSLRLADALTKAVRAALEAGERDRPLDVLVQASLDDDPSRGGCPIDDLSEL
ADVIAQRGDYLRLRGVMAVAPLGVDPEPAFERLAAVAERLRKDHPEATEISAGMSGDLDQAIAYGSTCVRVGTALLGGRG
LASP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpI19_1562 YP_005686005.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 1e-28 41
Cp1002_1555 YP_005681817.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 1e-28 41
CpC231_1557 YP_005683917.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 1e-28 41
cpfrc_01564 YP_003783964.1 hypothetical protein Not tested PiCp 6 Protein 1e-28 41