Gene Information

Name : Svir_02580 (Svir_02580)
Accession : YP_003132167.1
Strain : Saccharomonospora viridis DSM 43017
Genome accession: NC_013159
Putative virulence/resistance : Virulence
Product : ABC-type enterobactin transport system, permease component
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4779
EC number : -
Position : 256916 - 258013 bp
Length : 1098 bp
Strand : +
Note : PFAM: FecCD transport family

DNA sequence :
GTGAGCGACGACACCACGACCCGGTCCTCGACCCGGCCCTCGGCACCGCGGCCCGTCACCGGCACGGTGCTGCGGACCCG
GCGCGAGACCATCGCCCTGCGCGTGGACCCCCGAGCCGTGCTCGTGGGTTCGGTGCTGACGTTCGCCCTGCTCGTCACGA
TGGCGATCACGCTGACCACGGGCGAGTACGAGCTGTCCGTGTCGGAGGTCCTCGCCGCGGTGATCGGGCAGGGCGAGGGC
GCCGCCGACTTCATCGTCAACACGTTGCGGCTGCCCCGACTGCTCACGGCGCTGTTCGTGGGCGCGGCGCTGGCGGTCAG
CGGCGCGATCCTGCAAAGCCTCACCCGCAACCCGCTCGGCAGCCCGGATTTCGTCGGTTTCACCAACGGCGCCTCCACCG
GTGCCCTACTGGTGATCATCGCCGTCGGCGGGACCATGACGCAGGTCGCGGTCGGTGCGCTGCTCGGCGGCATCGTGACG
TCGGTGCTCGTCTACCTGCTGTCGTACCGGCGGGGAGTACAGGGCTACCGGTTCGTGCTCATGGGCGTCGGCGTCAACGC
GTTGGCCCTGTCCGTGAACTCCTATCTGATCACCAGGGCGGACATCTACGACGCGGTGAGCGCCCAAGCGTGGCTGGTGG
GCAGCGTGAACGGCCGCGACTGGGACCACGTCGCCGTCTCCGGACTGGCCCTGGCGATCCTCCTGCCGTTGGCGGCCAGC
CAGATCCGTGCGCTGTCGATGCTCGAACTGGGCGATCACACGGCCACCGCACTCGGGGTCGGGGTGCAGCGCAGCAGGGC
CATCCTCATCGTGGCGAGCGTGCTGCTGTCGGGTTTCGCCACCGCCGCCGCGGGACCGATCTGGTTCGTCGCGCTCGCCG
CGCCGCAGCTCGCCCGGAGGTTGACGCGTTCGCCGAATCCGGGGCTGGTCACGTCGGCCCTGATGGGCGGATTGCTGCTC
ACGGTGAGCGACCTGGCGATGCAACGACTGTTCCCCGCCGCGCAACTACCCGTGGGCACGGCCACGGGGTGCCTCGGCGG
GCTGTACCTGATGTGGCTGTTGGCGTCCGAATGGCGCGGGAAGGGCAGGTACGCGTGA

Protein sequence :
MSDDTTTRSSTRPSAPRPVTGTVLRTRRETIALRVDPRAVLVGSVLTFALLVTMAITLTTGEYELSVSEVLAAVIGQGEG
AADFIVNTLRLPRLLTALFVGAALAVSGAILQSLTRNPLGSPDFVGFTNGASTGALLVIIAVGGTMTQVAVGALLGGIVT
SVLVYLLSYRRGVQGYRFVLMGVGVNALALSVNSYLITRADIYDAVSAQAWLVGSVNGRDWDHVAVSGLALAILLPLAAS
QIRALSMLELGDHTATALGVGVQRSRAILIVASVLLSGFATAAAGPIWFVALAAPQLARRLTRSPNPGLVTSALMGGLLL
TVSDLAMQRLFPAAQLPVGTATGCLGGLYLMWLLASEWRGKGRYA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagB YP_003782431.1 integral membrane protein Not tested PiCp 1 Protein 8e-43 47
fagB YP_005684489.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 8e-43 47
fagB YP_005680308.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 1e-42 47
fagB YP_005682398.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 8e-43 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Svir_02580 YP_003132167.1 ABC-type enterobactin transport system, permease component VFG0928 Protein 6e-46 46