Gene Information

Name : Svir_25900 (Svir_25900)
Accession : YP_003134408.1
Strain : Saccharomonospora viridis DSM 43017
Genome accession: NC_013159
Putative virulence/resistance : Resistance
Product : transcriptional regulator, ArsR family
Function : -
COG functional category : K : Transcription
COG ID : COG0640
EC number : -
Position : 2792216 - 2792578 bp
Length : 363 bp
Strand : -
Note : PFAM: Bacterial regulatory protein, arsR family

DNA sequence :
ATGAGCGATGACCGGTGTGAGCTGTTGTGCATCGACCTCGAGCACGCCGAGGGCCTGCGTACGACGCTTCCCGAGACCGA
CACGCTGCAGGCCAGGGCGGAGCGCTTGCGCGCGTTGGGTGAACCGACCCGGCTGCGGATCGCGTATGCCCTGCACGCGG
GAGCCGAACTGTGCGTGTGCGATCTGGCCTGGATCATCGGTTCGTCACAAGGCCTGGTGTCCCATCACCTGCGTCAGTTA
CGCGCGGCCGGACTGGTGACCTCGCGTCGGGACGGCAAGCTGGTGATGTACCGGCTCACGCCCATCGCCGACCGGATGTT
GTCGGCGAGCACCGCGCCCGAGATGGAGGCGGACCCGGTATGA

Protein sequence :
MSDDRCELLCIDLEHAEGLRTTLPETDTLQARAERLRALGEPTRLRIAYALHAGAELCVCDLAWIIGSSQGLVSHHLRQL
RAAGLVTSRRDGKLVMYRLTPIADRMLSASTAPEMEADPV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cadC BAC57488.1 Cadmium efflux system accessory protein homolog, cadmium resistance protein C Not tested Type-IIIinv SCCmec Protein 1e-15 41
unnamed BAB47608.1 cadmium resistance protein C Not tested Type-III SCCmec Protein 1e-15 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Svir_25900 YP_003134408.1 transcriptional regulator, ArsR family BAC0456 Protein 1e-10 47