Gene Information

Name : Svir_02530 (Svir_02530)
Accession : YP_003132162.1
Strain : Saccharomonospora viridis DSM 43017
Genome accession: NC_013159
Putative virulence/resistance : Unknown
Product : putative NADP-dependent oxidoreductase
Function : -
COG functional category : R : General function prediction only
COG ID : COG2130
EC number : -
Position : 251818 - 252816 bp
Length : 999 bp
Strand : +
Note : PFAM: Zinc-binding dehydrogenase

DNA sequence :
ATGGAGGCGACGGAGGTCCGGCTCGCGTCTCGTCCGGAGGGGATGCCGACCCTCGATCACTTCGAGGTCGTCGATGTCGA
GGTGCCGAAGCCGGGGCCCGGGCAGGTCCTCGTGCGGAACACGTGGCTGTCGGTGGACCCCTACATGCGGGGTCGGATGA
GTTCGGCGAAGTCGTACGTCGCGCCGTTCGAGGTGGGCGAGGTCATGGACGGCGGCGCGATCGGCGAGGTCGTCGAGTCG
AACACCGACGAGTTGGCCGTCGGTGATGTGGTGCTGCACGGCCTCGGTTGGCGTACCCACGCCGTGCTCGACCCGGCTCG
GGCGCGCAAGCTCGATCCCTCCGCCGCGCCGGTGCAGGCGCACCTGAGCGTGCTGGGGATGCCGGGACTGACCGCGTACG
CCGGGTTGTTCGACGTGGCGAACATGCGTGAGGGCGACACGGTGTTCGTGTCCGGTGCGGCCGGGGCCGTGGGTTCGCTG
GTCGGGCAGCTCGCCAAGCTGCGTGGCGCGAAGCGGGTCATCGGCAGCGCCGGTTCCGCGGAGAAGGTGCGTTGGCTGCT
CGACGAACTGGGCTTCGACGCCGCGTTCAACTACAAGGACGGTCCGGTGCGGGAACAACTGCGCCAGGCCGCTCCCGACG
GTGTGGACGTGTACTTCGACAACGTCGGTGGGGAGCACCTCGAAGCGGCCATCGGCGCGTTGAACGTGCACGGTCGGATC
GCGGTGTGCGGCATGATCTCCCAGTACAACGCCACCGAACCGACGCCGGCGCCGCGCAATCTGGCCCAGATCATCGCCAA
GCGGTTCACCATGCGTGGTTTTCTGGTCGGTGACCACGAGCACCTGCGTCCGACGTTCCTCGCCGAGGTCTCCCCGCTGG
TGCGGGACGGCAAGATCGTCTACCGGGAGACCGTGGTGGACGGCATCCGGCAGGCGCCGCAGGCGTTCCTCGACCTGCTC
ACGGGTGGCAACACGGGCAAGATGCTCGTCCGCCTGTGA

Protein sequence :
MEATEVRLASRPEGMPTLDHFEVVDVEVPKPGPGQVLVRNTWLSVDPYMRGRMSSAKSYVAPFEVGEVMDGGAIGEVVES
NTDELAVGDVVLHGLGWRTHAVLDPARARKLDPSAAPVQAHLSVLGMPGLTAYAGLFDVANMREGDTVFVSGAAGAVGSL
VGQLAKLRGAKRVIGSAGSAEKVRWLLDELGFDAAFNYKDGPVREQLRQAAPDGVDVYFDNVGGEHLEAAIGALNVHGRI
AVCGMISQYNATEPTPAPRNLAQIIAKRFTMRGFLVGDHEHLRPTFLAEVSPLVRDGKIVYRETVVDGIRQAPQAFLDLL
TGGNTGKMLVRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0097 YP_252012.1 hypothetical protein Not tested SCCmec Protein 2e-55 43