Gene Information

Name : Svir_23260 (Svir_23260)
Accession : YP_003134161.1
Strain : Saccharomonospora viridis DSM 43017
Genome accession: NC_013159
Putative virulence/resistance : Unknown
Product : aldehyde dehydrogenase (acceptor)
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.8
Position : 2509450 - 2510919 bp
Length : 1470 bp
Strand : -
Note : PFAM: Aldehyde dehydrogenase family; TIGRFAM: glycine betaine aldehyde dehydrogenase

DNA sequence :
ATGTCCACTCTGTTCATTGACGGGCGTTGGACGTCCGCGTCCGCAGGAGCGACCCGGGAGGTCGTCAATCCCTACGACCA
GTCGGTGATACGTACGGTCGACGAAGGTGACTCCGCCGACGCGAACGCCGCTATCCGCGCGGCACGGGTGGCCTTCGACG
ACAGCCAATGGGGTGAGTGGACAGCCCGTCGTCGATCACGGTTGCTCCACCGCATCGCGGAGTTGTTGCAACGTGACCGG
GCGGAGATCGCGAGACTGGAGACGCTCGACACGGGCAAGACCCTGGTGGAAAGCGGCATCGACGTGGACGATGTCACCGC
GGTGTTCGAGTACTACGCCGCGCAGGCCGAATCCGACCCCGGTCGACTCGTCGATGCGGGGAATCCGGCCGTACGCAGCC
GCGTGGTGTACGAACCGGTGGGTGTCTGCGCGTTGATCGCGCCGTGGAACTACCCGTTGCTGCAGATGTCGTGGAAGGTG
GCCCCCGCGTTGGCGGCGGGCAACACGATGGTCCTCAAGCCCAGCGAGATCACCCCCTTGACCACCATCAAGTTGGTGGA
GCTCCTCGAGGAGGCGGGCACGCCACCAGGGGTGGTGAACCTCGTGCTGGGCCCGGGTGACCCGGTGGGGTCGACGCTTG
TGGAGAGTCCACAGGTGGATCTCGTGTCGTTCACGGGCGGCCTGGAGACCGGTCGTTCGATCATGAGTGCGGCGGCGGGC
ACGGTGAAGCGGGTGGCCTTGGAGCTCGGCGGCAAGAACCCGAACATCGTGTTCGCCGACGCCGATTTCGAGTCCGCCAT
CGATTACGCGCTCATCGCGGTGTTCTTCCATGCGGGTCAGGTGTGTTCGGCCGGAACCCGATTGGTGGTGGAGAACTCGC
TGCACGAACGGTTCGTAGCCGAATTGGTGAAGCGGGCGGAGCGGATCAAGCTCGGGAACGGTCTCGATTCCGACACCGAG
AGCGGCCCGTTGGTATCGGCCGAGCATCGTGCGAAGGTGGAACGCTATGTGCAGATCGGTATCGAGGAAGGCGCGTGGCT
GCTCGCCGGCGGTCGAAGGCCTGAGGAACCCGCGTTGAGCCAGGGATTCTTCTATCTGCCCACCGTGTTCGACGAGTGCC
GAAGCGACATGCGGGTGGTGCAGGAGGAGACGTTCGGTCCGATCATGACCGTGGAACGGTTCTCCAGCGTCGAGGAAGCC
GTACGTATCGGTAACGACACGACCTACGGCTTGGCCGGGGCGGTGTGGACGAGTGACACGCGCAAAGCCGAGTACGTGGC
CCGCAAACTGCGGCACGGCACCGTGTGGATCAACGACTTCGGCCCGTACCTGCCGCAGGCCGAATGGGGCGGTTTCAAGC
GTTCGGGTGTCGGCCGGGAACTGGGACACGCGGGACTGGCCGAATACCAGGAGGCCAAACACATCTACGAGAACACGGCC
CCCGAACCACAGCGGTGGTTCGCGCGTTGA

Protein sequence :
MSTLFIDGRWTSASAGATREVVNPYDQSVIRTVDEGDSADANAAIRAARVAFDDSQWGEWTARRRSRLLHRIAELLQRDR
AEIARLETLDTGKTLVESGIDVDDVTAVFEYYAAQAESDPGRLVDAGNPAVRSRVVYEPVGVCALIAPWNYPLLQMSWKV
APALAAGNTMVLKPSEITPLTTIKLVELLEEAGTPPGVVNLVLGPGDPVGSTLVESPQVDLVSFTGGLETGRSIMSAAAG
TVKRVALELGGKNPNIVFADADFESAIDYALIAVFFHAGQVCSAGTRLVVENSLHERFVAELVKRAERIKLGNGLDSDTE
SGPLVSAEHRAKVERYVQIGIEEGAWLLAGGRRPEEPALSQGFFYLPTVFDECRSDMRVVQEETFGPIMTVERFSSVEEA
VRIGNDTTYGLAGAVWTSDTRKAEYVARKLRHGTVWINDFGPYLPQAEWGGFKRSGVGRELGHAGLAEYQEAKHIYENTA
PEPQRWFAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 5e-67 42