Gene Information

Name : Svir_20800 (Svir_20800)
Accession : YP_003133920.1
Strain : Saccharomonospora viridis DSM 43017
Genome accession: NC_013159
Putative virulence/resistance : Virulence
Product : ABC-type enterobactin transport system, permease component
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4779
EC number : -
Position : 2223401 - 2224360 bp
Length : 960 bp
Strand : -
Note : PFAM: FecCD transport family

DNA sequence :
GTGGTGGCCGCGACGCTGATCGTGGCGATGGCCGGTTTGGCCCTGCTCGGATTGTGTTTCGGCGCGGTATGGTCCACTCC
GGCGGAGGTGTTCGCCGCGCTGGCCGGCTCGGGCGACTCGGCGTTGGTGATCCGGGAATGGCGATTGCCGCGGGTGCTGG
CCGGAATGGTCTTCGGCGCGGCACTGGGGGTGGCCGGGGCCATCTTCCAGAACCTCACCCGCAACCCCATGGGCAGTCCC
GACGTCATCGGCCTGGACGCGGGTGCCTACACCGGTGCCTTGTTCGCGCTGGTCGTGCTGTCGGGGACGGCGGCCCAGCT
GGCGGCGAGTTCGGTCGTGGGCGGCTTGGTGGTGGCGGTGGTCATCTACCTGTTGTCCAGTGTGGGCGGACTGTCCGGGC
TGCGGCTCGTCGTGATCGGCATCGCGGTGAACGCGATGGTGACCGCGTTGAACTCGTGGATCGTGCTCCGGGCGGAACTG
GAGGTCGCGATCGCCGCCGTGGGATGGAGTTCGGGGTCGCTAAACGGGGTCGGTTGGGAGGACCTGACGGTTCCGTTCAC
GGTCATCGCCGTCCTGCTGGCGCTGCTGGCGACTCAGGCGCAGTCCATTCACCAGGCCGCGTTGGGTGATGCCGTCGCGG
TGACCACCGGGGTGCGGCTGGAACGGTTGCGGTTGCTGATGGTGCTGGTGGGGGTCGGTTGCACGGCCACCGTGACGGCC
GTGGCCGGACCGATCGCGTTCATCGCCTTGGCGGCGCCGCAGATCGGACGTCGATTGGCGAAGGCGCCGGGGATCCCCCT
CGTTCCGGCCGCGTTGACCGGAGCGGTGCTGTTGCAGGCGGCGGATCTGATCGCCCAGATGTTGCTGGCCCCCGTCTCAC
TTCCGGTGGGGGTGGTGAGTACCGCCATCGGTGGGTGCTATCTCATCTGGCTGCTGACTCAGGAGGTGAAGCGAGCGTGA

Protein sequence :
MVAATLIVAMAGLALLGLCFGAVWSTPAEVFAALAGSGDSALVIREWRLPRVLAGMVFGAALGVAGAIFQNLTRNPMGSP
DVIGLDAGAYTGALFALVVLSGTAAQLAASSVVGGLVVAVVIYLLSSVGGLSGLRLVVIGIAVNAMVTALNSWIVLRAEL
EVAIAAVGWSSGSLNGVGWEDLTVPFTVIAVLLALLATQAQSIHQAALGDAVAVTTGVRLERLRLLMVLVGVGCTATVTA
VAGPIAFIALAAPQIGRRLAKAPGIPLVPAALTGAVLLQAADLIAQMLLAPVSLPVGVVSTAIGGCYLIWLLTQEVKRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagB YP_003782431.1 integral membrane protein Not tested PiCp 1 Protein 3e-32 42
fagB YP_005684489.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 3e-32 42
fagB YP_005680308.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 2e-32 42
fagB YP_005682398.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 3e-32 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Svir_20800 YP_003133920.1 ABC-type enterobactin transport system, permease component VFG0928 Protein 2e-27 47