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Name : Svir_19880 (Svir_19880) Accession : YP_003133833.1 Strain : Saccharomonospora viridis DSM 43017 Genome accession: NC_013159 Putative virulence/resistance : Unknown Product : ATPase component of various ABC-type transport systems with duplicated ATPase domain-containing protein Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : - Position : 2119737 - 2121392 bp Length : 1656 bp Strand : - Note : PFAM: Oligopeptide/dipeptide transporter, C-terminal region; ABC transporter; TIGRFAM: phosphonate C-P lyase system protein PhnK DNA sequence : ATGACGCCGGCGACACCTTTGCTGCAGATGAACGACCTCGGGGTCACCTACCGCACCAGTGACGGGGAGTTCGCCGCGGT ACGCGATGTGAACCTGACCTTGCACGCCGGGGAGACGTTGGGTATCGCAGGCGAGTCCGGGTCGGGCAAGTCGACCGTGG CGATGAGTGTGCTGCGGTTGTTACCGAAAACGGCGACGGTGACCGGGCAGGTGCTGCTCGACGGTGAGGACGTCAACACC ATGCGGTGGGGGCGGCTGCGGGCGGTGCGCTGGTCCTCGGCGTCGATCGTGTTCCAGGGCGCCATGCACGCGTTGAACCC GGTGCGCACGATCGGGGAGCAGATCGCCGAGCCACTGCGACTGCACACCACCACCAACGGGTCGACGAAGGACCGGGTGG CGGAGCTGCTGCGACAGGTCGACCTTCCCCCGGAACGGGCCAACGCGTACCCGCACGAGCTGTCCGGCGGGCAGAAACAG CGGGTGATGATCGCGATGGCGTTGGCGTGCGAGCCGAAGCTGATCGTCGCCGATGAGCCGACCACGGCGTTGGACGTGGT GGTGCAGGATCAGGTGCTGCAACTGGTGAGCCGGTTGGTCACCGAACGCGGCATCGGACTGATCATGATCAGCCACGATC TGGCCGTGTTGGCGCAGACGTGCGCGCGGATCGCGGTCATGTATCGGGGCAGGATCGTGGAGGAGGGCACCTCGGCCGAG GTGTTCGGACAACCCCGACACGAGCACACCCGCGCGCTGGCCGACGCGATTCACCAGGTCGGGGATCCGCAGGCGCGGAT GGTCACCGGCGAGGAGAGCACCCCGGCGGCCGGGCTCTCGGATGACCCGCCAACAGGTGAGGTGGACAGGGAACTGCTGG CCGTCCGGGACCTGGTGGTGACGTTCCGTGACCGGTCGCGGGGGATGGTGCGGGCGGTCGACGGGGTGGATCTGGGGGTC CGCCGCGGGGAGATCGTCGCCTTGGTCGGACAGTCGGGCTCGGGGAAGACGACGCTGGCGCGCACCATGCTCGGCCTCCA GCGGCCCACATCGGGGTCGGTGCTGTTCGACGGTGCCCTCCTGCCGACCTCGACGGCGGGGCTGCGGGCCTACCGGCGGC GGGTGCAACTGGTGCTGCAGGACCCCACCAGTGCGCTCAACCCGCGACACACGGTGTACGAGGCGGTGGCGGAGGGGCCA CGGATCCATCGCCTGCCCGGGGACGAACGGGACATCGTGATCTCGGCGTTGGAGGCGGCGGAACTACGTCCCGCGGAGCG GTTTTTGTCCCGATTGCCGCACGAGCTGTCCGGTGGGCAACGGCAACGGGTGGTCATCGCCGGGGCGTTGGCGTGTGAGC CGAGTGCGCTCATCGCCGACGAACCGGTGGCGTCGTTGGACGCCACGGTGCGTAACGAGATCCTGGCGCTGTTGTTGCGG CTGCGGCGGGAGCTCGGCCTGGCGGCGTTGGTGATCACCCACGATCTGGGGTTGGCGTGGGCCATCGCCGATCGGGTGGC GGTGATGCGACAAGGGCGGATCGTGGAATCCGGGCCGGTGGAGCAGGTGCTGCAAAGCCCCCGGCACGACTACACGAAGG CGCTGCTTGCGGCACTCCCGGCCCCTTCGGCGAGCGCTTTTCGTCGCAGTGTGTAA Protein sequence : MTPATPLLQMNDLGVTYRTSDGEFAAVRDVNLTLHAGETLGIAGESGSGKSTVAMSVLRLLPKTATVTGQVLLDGEDVNT MRWGRLRAVRWSSASIVFQGAMHALNPVRTIGEQIAEPLRLHTTTNGSTKDRVAELLRQVDLPPERANAYPHELSGGQKQ RVMIAMALACEPKLIVADEPTTALDVVVQDQVLQLVSRLVTERGIGLIMISHDLAVLAQTCARIAVMYRGRIVEEGTSAE VFGQPRHEHTRALADAIHQVGDPQARMVTGEESTPAAGLSDDPPTGEVDRELLAVRDLVVTFRDRSRGMVRAVDGVDLGV RRGEIVALVGQSGSGKTTLARTMLGLQRPTSGSVLFDGALLPTSTAGLRAYRRRVQLVLQDPTSALNPRHTVYEAVAEGP RIHRLPGDERDIVISALEAAELRPAERFLSRLPHELSGGQRQRVVIAGALACEPSALIADEPVASLDATVRNEILALLLR LRRELGLAALVITHDLGLAWAIADRVAVMRQGRIVESGPVEQVLQSPRHDYTKALLAALPAPSASAFRRSV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-68 | 42 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-68 | 42 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 2e-68 | 42 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-68 | 42 |
