Gene Information

Name : Svir_18140 (Svir_18140)
Accession : YP_003133664.1
Strain : Saccharomonospora viridis DSM 43017
Genome accession: NC_013159
Putative virulence/resistance : Resistance
Product : ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1116
EC number : 3.6.3.25
Position : 1881907 - 1882710 bp
Length : 804 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence :
GTGACCACGAAGATCAGCTTTCAAGGTGTCGGACGCACGTTTCCCGTCCGCGACGGTCGTGAGCGTCTCACGGCGCTCGC
GTCGATCGACCTGGATGTCGCCGACGGTGAACTTTTGACCGTGGTGGGGCCCAGCGGCTGCGGCAAATCCACACTGTTGG
ACCTTCTCGCCGGCCTGCTCACCCCCACCTCGGGACGCGTCCTGCTCGACGGCGAAGAGGTGACCGGGCCGGGGTCGGAC
CGCGGCGTCGTCTTCCAGCAGTACGCCCTGCTGCCGTGGCGCACCGCGCAAGGCAACGTCGAATTCGGCTTGGAGGCCAC
CGGTGTCCCGCGCAAGGAGCGAGCGGAGCTGGCTCGCGAATATCTCGACCTGGTGGGGCTCGCCGCTTTCGCCGACCGGT
ATCCGCATGAACTCTCCGGCGGGATGAAGCAGCGTGTGGCGATCGCACGCAGCCTCGCCCACGACCCCGAGGTACTCCTG
ATGGACGAACCGTTCGCCGCGCTCGACGCGCAGACCCGGGAGTCCTTGCAGGACGAGCTGCGACGCATCTGGCGACGTAC
CGGAAAGACCGTCGTGTTCATCACGCACGGCATCGACGAAGCCGTCTACCTCGGACAACGGGTGGCGGTGCTGACCTCCC
GCCCGGGTCGAGTCAAGTCTGTTGTGGACATAGATTTGGACCGGGAGTCGACGGGCGACGTTCGTTCGACCCCGGAATTC
GCCCACTATCGACACAAGGTCTGGACACTGCTGCACGACGAGGTCGTGCGCGCACGGACGTTCAAGGAGGGGTCGCCGGC
ATGA

Protein sequence :
MTTKISFQGVGRTFPVRDGRERLTALASIDLDVADGELLTVVGPSGCGKSTLLDLLAGLLTPTSGRVLLDGEEVTGPGSD
RGVVFQQYALLPWRTAQGNVEFGLEATGVPRKERAELAREYLDLVGLAAFADRYPHELSGGMKQRVAIARSLAHDPEVLL
MDEPFAALDAQTRESLQDELRRIWRRTGKTVVFITHGIDEAVYLGQRVAVLTSRPGRVKSVVDIDLDRESTGDVRSTPEF
AHYRHKVWTLLHDEVVRARTFKEGSPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 3e-39 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Svir_18140 YP_003133664.1 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component NC_012469.1.7686878. Protein 1e-29 41