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Name : Svir_15980 (Svir_15980) Accession : YP_003133460.1 Strain : Saccharomonospora viridis DSM 43017 Genome accession: NC_013159 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : - Position : 1640623 - 1642722 bp Length : 2100 bp Strand : - Note : catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during expo DNA sequence : GTGTCGGAGATTGCCGCTACGGAGAACAACCCACTGTTGCGTCGGAACTACCCGGCCGACTGGACGGATCTGGACACCCG CGCGGTGGACACGATCCGCGTGCTGGCGGCCGACGCCGTCGAACACTGTGGCAGCGGACACCCCGGCACAGCCATGAGCT TGGCGCCGGTGGCGTACTCCTTGTTCCAGCGCATCATGCGCCATGACCCCGCGGATCCGGAGTGGCCGGCCCGGGACCGG TTCATCCTCTCGGCCGGACACAGCAGCCTCACGCTGTACCTCCAGCTGTTCCTCGCCGGCTACGGCCTGGAGATGGAGGA CATCAAGCAGCTTCGTAAGTGGGGGTCGAAGACACCCGGCCACCCGGAGTACCGCCACACCCCGGGTGTGGAGACCACGA CGGGACCGCTGGGTCAGGGGTTGGCCAACGCCGTGGGTATGGCCATGGCGGCCCGCCGGGAGCGTGGGCTGCTCGACCCG GACACCCCGCAGGGGGAAAGCCCGTTCGACCACCACATCTACGTGATCGCCTCCGACGGTGACATCCAGGAGGGCGTGAC GGCCGAGGCGTCGTCTTTGGCGGGCCGGCAGGAACTCGGCAATCTGATCGTCATCTACGACGACAACAAGATCTCCATCG AGGACGACACCAACATCGCCTTCTCCGAGGACACCGCCAAGCGTTACGAGGCGTACGGCTGGCACGTCCAGGTCGTCGAG GGCGGCGAGGACGTCGCGGCCTTCGAGCAGGCCATCGAGGCCGCGAAGGCCGAGACCACCCGGCCGTCGTTCATCGTGCT GCGCACCGTGATCGGCTATCCAGCGCCGAACAAGATGAACACCGGTAAGGCCCACGGCGCTGCGCTCGGCGCCGACGAGG TGGCCGCCGTCAAGGAGATCCTCGGCTTCGACCCCAAGGTCAGCTTCCACATCGACGACGAGGTGCTCGCCCACACCCGC AAGGTGAAGGAGCGTGCACGTGCCGCTCGCGAGCAGTGGCAGCAGGCCTTCGACGCCTGGGCGCAGGCCAACCCGGAGCG GAAGGAGCTCGCCGACCGGCTCCGGACCCGCTCGCTTCCCGAGGGGTGGGCCGAGAAGCTCCCGAGCTGGGAACCCGACC CGAAGGGTCTTGCGACCCGGAAGGCGTCCGGGGAGGTCCTCAACGCCATCGGCGATGCGCTGCCCGAACTGTGGGGTGGC TCCGCCGACCTGGCCGAGAGCAACAACACCCTCATCAAGAACTCGGACTCGTTCGGCCCCGAAAGCGCCTCCACCGACAT GTTCACCGCCCACCCCTACGGCAGGAACCTGCACTTCGGGGTGCGTGAACACGCGATGGGCGCGATCCTCAACGGCATCG CCCTCCACGGAGGCACCCGCCCCTACGGCGCCACGTTCCTCATCTTCAGCGACTACATGCGGCCTTCCGTCCGCCTCGCG GCGCTGATGAAGGCCCCCGTGATCTACGTGTGGACGCACGATTCGATCGGCCTCGGTGAGGACGGGCCCACCCACCAGCC GGTCGAACAGTTGGCCTCGCTGCGCGCGATCCCCGGTCTGAACGTCGTTCGCCCCGCCGACGCCAACGAAACGGCCGCGG CGTGGAAGGCGGCGCTGGAGGACGTCCACAACCCCACGGGCCTGGCACTGACCCGACAGAACGTGCCGGTGCTGGAGGGC ACCAGCGCCGAAGGCGTCGCCAAGGGCGGCTACGTGCTGGCCGAGGCCTCCAACGGCTCCCCCGAGGTCGTGCTGATCGC CACGGGCTCGGAGGTGCAGCTCGCGGTGGAGGCCCGCAAGGTGCTCGAAGCCGAGGGAGTGCCCGCCAGCGTGGTGTCGA TGCCGTGCGTGGAGTGGTTCGACCGGCAGGACCAGGAGTACCGCGACGCGGTTCTCCCCCCGACCGTCAAGGCCCGCGTC ATCGTCGAGGCCGGGACGGCCCAGCCGTGGTACCGGTTCGCGGGCGAGGCGGGCGAGATCATCTCGATCGAGCAGTTCGG CGCCTCGGCGGACTACAACACGTTGTTCGAGAAGTTCGGGTTCACCACCGAAGCCGTGGTGGAGGCCGCCCGTCGGTCGC TGGCGAAGGCGAAGAGCTGA Protein sequence : MSEIAATENNPLLRRNYPADWTDLDTRAVDTIRVLAADAVEHCGSGHPGTAMSLAPVAYSLFQRIMRHDPADPEWPARDR FILSAGHSSLTLYLQLFLAGYGLEMEDIKQLRKWGSKTPGHPEYRHTPGVETTTGPLGQGLANAVGMAMAARRERGLLDP DTPQGESPFDHHIYVIASDGDIQEGVTAEASSLAGRQELGNLIVIYDDNKISIEDDTNIAFSEDTAKRYEAYGWHVQVVE GGEDVAAFEQAIEAAKAETTRPSFIVLRTVIGYPAPNKMNTGKAHGAALGADEVAAVKEILGFDPKVSFHIDDEVLAHTR KVKERARAAREQWQQAFDAWAQANPERKELADRLRTRSLPEGWAEKLPSWEPDPKGLATRKASGEVLNAIGDALPELWGG SADLAESNNTLIKNSDSFGPESASTDMFTAHPYGRNLHFGVREHAMGAILNGIALHGGTRPYGATFLIFSDYMRPSVRLA ALMKAPVIYVWTHDSIGLGEDGPTHQPVEQLASLRAIPGLNVVRPADANETAAAWKAALEDVHNPTGLALTRQNVPVLEG TSAEGVAKGGYVLAEASNGSPEVVLIATGSEVQLAVEARKVLEAEGVPASVVSMPCVEWFDRQDQEYRDAVLPPTVKARV IVEAGTAQPWYRFAGEAGEIISIEQFGASADYNTLFEKFGFTTEAVVEAARRSLAKAKS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 3e-124 | 47 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 1e-123 | 47 |
