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Name : Svir_01270 (Svir_01270) Accession : YP_003132042.1 Strain : Saccharomonospora viridis DSM 43017 Genome accession: NC_013159 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 133732 - 134997 bp Length : 1266 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : GTGATTGACCTGAGGACTCTGCGCGAGGAACCGGATGTCGTGCGCGCTTCGCAGCGCGCCCGCGGTGAGGACGTCGGTGT GGTGGACAGGTTGCTGTCCCTCGACGCCGAACGCAGGTCCGCCATCGCCAAGGCCGACAACCTCCGCGCCGAGCAGAAAC AGCTCGGTAAGCGCATCGGCAAGGCGTCCGGTGAGGAACGTGAGGCCTTACTCGCGCGGGGCAAGGAGCTCGCCGCCCAG GTCAAGGAGGCCGAAGCCGAACAGAACCGCGCCAGCGAGGAGTTCGAGAAGCTCTACAACGTGGTGCCGAACATCGTGCA CCCGGACGTTCCCGAGGGCGGTGAGGACGACTACGTCGTGCTCAAGCGCGTGGGTACGCCCCGGGAGTTCGACTTCACGC CCAAGGACCACTTGGAGCTGGGTGAGGCTCTGGGCGCCATCGACACCGAACGCGGCGCCAAGGTTTCGGGTGCCCGGTTC TACTTCCTCACCGGGGTCGGGGCGCAGTTGCAGCTGGCGCTGTTGAACATGGCGGCGGCCCAGGCGGTGGAGAAGGGCTT CCAGCTCATGATCCCGCCGGTGTTGGTGCGGCCGGAGATCATGGCGGGGACGGGTTTCCTCGGCGCGCATTCGTCGGAGG TGTACCGCCTGGCCGACGACGACCTGTACCTGGTCGGGACCTCCGAGGTGTCGTTGGCGGGGTATCACGCCGACGAGATC CTCGACCTGTCGAACGGCCCGTTGCGGTACGCGGGTTGGTCGTCGTGCTTCCGTCGAGAAGCCGGTTCGTACGGCAAGGA CACGCGCGGCATCATCCGCGTCCACCAGTTCGACAAGGTGGAGATGTTCATCTTCTGCAGGCCGTCCGAGGCCGAGGCCG AGCACGAGAAGCTGTTGGCGTGGGAGGAGGAGATGCTCGCCAAGATCGAGGTGCCCTACCGGGTGATCGATACGGCGGCG GGCGATCTCGGCACCAGCGCGGCGCGTAAGTACGACTGTGAGGCCTGGATCCCCACGCAGCAGGCGTACCGCGAGCTGAC CTCGACGTCGAACTGCACGACCTACCAGGCGCGCAAGCTGTCGGTGCGCTACCGGGACGAGGACGGGCGCCCGCAGCACG CCGCGACCCTCAACGGCACTCTCGCCACCACCCGGTGGATCGTGGCCATCCTGGAGAACCACCAGCAGCCCGACGGTTCG GTGCGGGTTCCGGAGGCGATGCAGCCGTTCCTCGGTGGGAGGACCGTGCTGACACCGATCGACTGA Protein sequence : MIDLRTLREEPDVVRASQRARGEDVGVVDRLLSLDAERRSAIAKADNLRAEQKQLGKRIGKASGEEREALLARGKELAAQ VKEAEAEQNRASEEFEKLYNVVPNIVHPDVPEGGEDDYVVLKRVGTPREFDFTPKDHLELGEALGAIDTERGAKVSGARF YFLTGVGAQLQLALLNMAAAQAVEKGFQLMIPPVLVRPEIMAGTGFLGAHSSEVYRLADDDLYLVGTSEVSLAGYHADEI LDLSNGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEMFIFCRPSEAEAEHEKLLAWEEEMLAKIEVPYRVIDTAA GDLGTSAARKYDCEAWIPTQQAYRELTSTSNCTTYQARKLSVRYRDEDGRPQHAATLNGTLATTRWIVAILENHQQPDGS VRVPEAMQPFLGGRTVLTPID |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 4e-70 | 43 |
