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Name : Svir_11320 (Svir_11320) Accession : YP_003133015.1 Strain : Saccharomonospora viridis DSM 43017 Genome accession: NC_013159 Putative virulence/resistance : Virulence Product : ATPase with chaperone activity, ATP-binding subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1168609 - 1171149 bp Length : 2541 bp Strand : + Note : PFAM: ATPase family associated with various cellular activities (AAA); ATPase family associated with various cellular activities (AAA); C-terminal, D2-small domain, of ClpB protein DNA sequence : ATGACCGGCTTCTTCGGGGCCGACCCCGGCCCGAGCCCGTTCGATTCGCTGCTCGCCCAATTCTTCGGCAACGCCTTCCC GGGGCGGCGGCCGCACGCGGTCGGGATCACGCGTCTGATGAGTGAGCAAGCGCTGGCTTTGGTGTCGGCGGCCGTACGTC AGGTCGCGGAGTGGGGGAATCGGGAACTGGACTCCACCCACCTGCTGTGGGCGGCGACCAGAGTTCCCGGAAGCCGGGAG CTGATTCAGCGAGCGGGGGCCGATCCGGACGCGTTGGCCGAGCGGATGGAGCGGGAGGCCACCGAACGTCGGCAGGAGGT GAGGGGCACGCCCGTGCTCACCCCGGGCGCGAAGCGCACCCTGTTGGACGCCCACCAGATCTCCCGTGGGTTGCGGTCGT CCTACATCGGGCCCGAACACATACTGCTGGCGTTGGTGGCCAACCCCGACTCCCGAGCGGGGTTGATGTTGAACGAGGCG GGGGTGACGCCCGAGACGATGCAGCGTGCGCTCTCGGGGACGACGAGCCCGGCCAACGGCGTCCACGACGGGGGTCGACG GGCCGCCACCCAGACCCCGACCCTGGACGAGTACGGACGCGATCTCACCGAGATGGCCCACAACGGTGAGATCGACCCCG TGGTGGGACGGGACAACGAGATCGAACAGACCATCGAGGTGCTGTCCCGGCGCACCAAGAACAACCCGGTGTTGATCGGG GAGGCGGGTGTCGGGAAGACCGCCATCGTGGAAGGGCTGGCGCAGCGGATCGTGGACGGGCAGGTGCCCGAGTCGATGAT CGATCGTCGGGTGGTGCAGCTCGACCTCACCGCGATGGTCGCGGGGACGCGGTACCGCGGCGATTTCGAGGAGCGTATGA CGAAGTTGCTCGACGAGCTGCGCAAGAACCAGGGCAAACTCATCGTGTTCATCGACGAGTTGCACACGGTGGTCGGCGCG GGGTCCTCGGAGGGCTCGATGGGCGCGGGCAACATGCTCAAGCCCGCGTTGGCGAGGGGGGAGTTGCACATCGTCGGCGC GACGACGTTGGACGAGTACCGCGAGAACATCGAGAACGACCCCGCGTTCGAACGGCGGTTCCAGCCCATTCTGGTGCCCG AGCCCAGCGTGGAGGACACGGTCGCGATCCTGCGCGGACTGCGTGACCAGTACGAGGCCCACCACCAGGTGCGCTTCACG GATGAGGCGCTGGACGCGGCGGCCACCCTGTCCGACCGCTACATCAGCGACCGGTACCTCCCCGACAAGGCCATCGACCT CATCGACCAGGCCGGTGCGCGTGTACGGATGCGCACGGGCCGGTGGTCGGAACGGGTGCGGGAGATGGAGGCGCGCCTGG AACAGCTGTACCGCGACAGGGACCAGGCCGTGAGCGAGGAGCACTACGAACGCGCCTCGGCGTTGCGGGACGAGATCCAG GACCTGCGCAACCGACTCGAGGAGGAACGCAAGGAGGATCACCCGACCCGAGCGCCCGAGGTCACCTCCACCCACATCGC CGAGGTGGTGTCCCGCAGCACCGGTATCCCGGTGACGCAGTTGACCCAGGAGGAACGGGAACGGTTGCTGCGGTTGGAGG AACACCTGCACGGTCGGGTGGTCGGACAGGACGAGGCGGTGTCCGCCGTGGCCGAGGCCGTGCGCAGGGCCCGCACCGGA CTCGCGGAGCCGGACCGGCCGTCGGGGAGTTTCCTGTTCCTCGGACCGACCGGTGTCGGCAAGACCGAACTGGCGAGGGC GTTGGCCGAGGCGCTGTTCGGTAGCGAGGACCACATGGTCCGGCTCGACATGTCCGAGTACGGCGAGCGGCACACGGCCA GCAGGCTCGTCGGCGCGCCTCCCGGATACGTCGGCTACGAGGAGGCCGGGCAGTTGACCGAGGCCGTGCGCAGGAAGCCG TACTCGGTGATCCTGCTCGACGAGATCGAGAAGGCCCATCCGGACGTGTTCAACCTGCTGTTGCAGGTGATGGACGACGG GCGGCTCACCGACGGGCGGGGCCGTACGGTGAACTTCACCAACACGGTGCTCATCATGACCAGCAACGTCGGTTCCGAAC TTGTGCTGAGCGGGACGCAGGGTGCCCTCGGCTTCGCCCCGGAGGACGAGAGCGACACGGAACGTCCGTTGCGGGAACGG CTCATGCGCAGGTTGCGGGAGACCTTCCGACCCGAGTTCCTCAACCGCATCGACGAGATCATCGTGTTCCACAAGCTTTC GGAAGAGCAGCTGGAGCAGATCACGACGTTGCTGCTGGAGGACACCAAGCGCAAGGCCCATGCGCAGGGCGTGAACGTGG AGTTCGCGCCGGAGGCGGTGCGGTGGCTGTCGGAGGCGGGCTATCAACCCGAGTACGGCGCCCGCCCGTTGCGTCGGACC ATTCAGCGCGAGGTCGACAACGTGTTGTCGAGGATGCTGCTCGAGGGTGAGGTCGGCACGGGTGCGGATGTCAACGTGAC GGTGCGGGACGGTCGGCTCGCCTTCGACGTCGCGGCGCCGGCCGCTCCGATCGGCCACTGA Protein sequence : MTGFFGADPGPSPFDSLLAQFFGNAFPGRRPHAVGITRLMSEQALALVSAAVRQVAEWGNRELDSTHLLWAATRVPGSRE LIQRAGADPDALAERMEREATERRQEVRGTPVLTPGAKRTLLDAHQISRGLRSSYIGPEHILLALVANPDSRAGLMLNEA GVTPETMQRALSGTTSPANGVHDGGRRAATQTPTLDEYGRDLTEMAHNGEIDPVVGRDNEIEQTIEVLSRRTKNNPVLIG EAGVGKTAIVEGLAQRIVDGQVPESMIDRRVVQLDLTAMVAGTRYRGDFEERMTKLLDELRKNQGKLIVFIDELHTVVGA GSSEGSMGAGNMLKPALARGELHIVGATTLDEYRENIENDPAFERRFQPILVPEPSVEDTVAILRGLRDQYEAHHQVRFT DEALDAAATLSDRYISDRYLPDKAIDLIDQAGARVRMRTGRWSERVREMEARLEQLYRDRDQAVSEEHYERASALRDEIQ DLRNRLEEERKEDHPTRAPEVTSTHIAEVVSRSTGIPVTQLTQEERERLLRLEEHLHGRVVGQDEAVSAVAEAVRRARTG LAEPDRPSGSFLFLGPTGVGKTELARALAEALFGSEDHMVRLDMSEYGERHTASRLVGAPPGYVGYEEAGQLTEAVRRKP YSVILLDEIEKAHPDVFNLLLQVMDDGRLTDGRGRTVNFTNTVLIMTSNVGSELVLSGTQGALGFAPEDESDTERPLRER LMRRLRETFRPEFLNRIDEIIVFHKLSEEQLEQITTLLLEDTKRKAHAQGVNVEFAPEAVRWLSEAGYQPEYGARPLRRT IQREVDNVLSRMLLEGEVGTGADVNVTVRDGRLAFDVAAPAAPIGH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 5e-152 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Svir_11320 | YP_003133015.1 | ATPase with chaperone activity, ATP-binding subunit | VFG0079 | Protein | 2e-173 | 54 |
| Svir_11320 | YP_003133015.1 | ATPase with chaperone activity, ATP-binding subunit | VFG0080 | Protein | 1e-141 | 51 |
