|
Name : Svir_10910 (Svir_10910) Accession : YP_003132974.1 Strain : Saccharomonospora viridis DSM 43017 Genome accession: NC_013159 Putative virulence/resistance : Unknown Product : putative RND superfamily drug exporter Function : - COG functional category : R : General function prediction only COG ID : COG2409 EC number : - Position : 1123186 - 1125372 bp Length : 2187 bp Strand : - Note : PFAM: MMPL family DNA sequence : GTGGCCACCTTCCTCGCCCGACTCGGTCGTGCGTCCTTTCGGCGACGCCGCCTGGTCACCAGTCTGTGGGTGCTCCTGCT CGTGGTCTTCGGCATCGGCGCCCTCACGATGTCCGGGCAGACCACCAACTCCGTGACCATCCCCGGCACGGAGGCGCAGC AAGCCATCGACCGCCTCGAGGAGAGGTTCCCGGAAGCAGGGGTCGGCAAGGGCTCGGTGAACGTCGCCGTCGCACCACCC GAGGGACAGCAGCTCGACCCGCAGATCGTGGCCGGACTCGTCAAGAACCTCGGTGAAGCGCCGAACGTCGCCACCGTCAC CGACCCGTTCCAGACGAAGTCGATCGCACCCGACGGCTCGCTCGCCCTGATCCAGGTCGTCTACCGGATGCCCTCGCCGG AGGTCACCGACGCCGATCGGGACGCGCTCCAAGCCGCCGCCCAGTCCACACGCGACGCGGGCTGGACGGTCGAGTTCGGC GGGGACGCCATGCAGGGCATCCCGGTCACCCAACCCACCGAAGGCATCGGCGTGATCGTCGCCGCCGTCGTGCTCATCGT CACATTCGGTTCACTGGTCGCGGCCGGACTCCCCCTGGTCACGGCGCTGATCGGCGTCGGCATCGGCATGGCCGGCATCA CCGCCCTGTCGGGGGTCGTCGACCTCAACGCCAACACCCCGGTGCTCGCGCTGATGATCGGCCTCGCCGTCGGCATCGAC TACGCGCTGTTCATCGTGTCCCGTTACCGCACCGAACTGGAAAGCGGGGCGGCCCCCGAGGACGCCGCCGCCACGGCCGT GGGCACCGCGGGTTCGGCCGTCGTGTTCGCCGGGCTGACCGTCATCATCGCGCTCGCCGGGCTCACCGTGGTGGGCATCC CCATCCTCGGCCAGATGGGACTGGCGGCCTCGGCCACCGTCGCCATCGCCGTCCTCATCGCCGTCACGCTCCTGCCCGCC GTCCTCGGCTTCGCGGGCACCAAGGTGCTCGGCGGCCGGATACCGGGTCTGCGCCGTCCGGCGAGGCCCGGGCCGACCGC GGGCTGGCGGTGGTCCTCCTTCCTCGCCCGTCGGCGTGTCGTGATGTTGCTCGCGACCGTGGCCGGTCTCGCGGTGTTGG CCGTTCCCGCCGCGGACATGCGACTCGGTCTGCCCAACGACGCCACCGCCGCCCCCGATTCGACACAGCGCAAGGCCTAC GACCTGATCAGCGAAAGCTTCGGCCCCGGCCTGAACGGTCCCCTCGTCGTCGTGCTCGACGCGGCGAACGACCCGCAGAG CGCGACACAGGCCGCGATGCAACGCATCAACGCGCTCGACAACGTGGCCATGGTCATGCCGCCCCAGTTCAACCGCGCAC ACGACACGGCATTGCTCACCGTGATCCCCTCGACCGGTCCGGAGACCCAGGAGACCGAGGACCTCGTCGCCGACATCCGC GCGCTGAGCGGCCAGCTGGAAGCCGACACCGGTGCCACCATGTCGGTCACCGGTGCCACCGCCATGGACATCGACATCTC CCAGCGGATGGCCGACGCCCTGCTGCCCTACCTCTCCCTGGTCGTCGGGTTGGCGTTCATCCTGCTGATGATCGTGTTCC GGTCGGTCCTCGTGCCGCTTTCGGCGACCCTGGGCTTCCTCGGTTCCGTCGGCGCCACGTTCGGCGCGGTCGTGGCCGTG TTCCAGTGGGGTTGGCTCGGCGACCTGCTCGGCGTCGACGCCACCGGGCCGGTCATGAGCGTGCTGCCCGTCCTGCTGAT CGGTGTGCTGTTCGGCCTCGCCATGGACTACCAGGTGTTCTTGGTGACCCGCATGCGCGAGGAATACGTCCACGGTCGGT CCCCCGACGAGGCGATGATCACCGGCTTCAAGCACGGCTCACGCGTCGTGGTGGCCGCCGCGCTCATCATGATCAGCGTG TTCGCCGGTTTCGTCCTCGCCGAGTCGGTCCTCATCCAGTCGATCGGATTCGCGCTCGCGTTCGGGGTGGCCGTGGACGC GTTCGTGGTGCGGATGACCATCGTGCCCGCCCTGATGTCGTTGCTCGGCCGGAGCGCGTGGTGGTTGCCTCGCTGGCTGG ACCGCGTCCTGCCCAACGTGGACGTGGAGGGCGAGAAGCTCACCCGGGGAACGGGCGGCGACGGCGGCTCCGACGGCGAC CGTGAACTGGAACCGCTCGCCCGTTAG Protein sequence : MATFLARLGRASFRRRRLVTSLWVLLLVVFGIGALTMSGQTTNSVTIPGTEAQQAIDRLEERFPEAGVGKGSVNVAVAPP EGQQLDPQIVAGLVKNLGEAPNVATVTDPFQTKSIAPDGSLALIQVVYRMPSPEVTDADRDALQAAAQSTRDAGWTVEFG GDAMQGIPVTQPTEGIGVIVAAVVLIVTFGSLVAAGLPLVTALIGVGIGMAGITALSGVVDLNANTPVLALMIGLAVGID YALFIVSRYRTELESGAAPEDAAATAVGTAGSAVVFAGLTVIIALAGLTVVGIPILGQMGLAASATVAIAVLIAVTLLPA VLGFAGTKVLGGRIPGLRRPARPGPTAGWRWSSFLARRRVVMLLATVAGLAVLAVPAADMRLGLPNDATAAPDSTQRKAY DLISESFGPGLNGPLVVVLDAANDPQSATQAAMQRINALDNVAMVMPPQFNRAHDTALLTVIPSTGPETQETEDLVADIR ALSGQLEADTGATMSVTGATAMDIDISQRMADALLPYLSLVVGLAFILLMIVFRSVLVPLSATLGFLGSVGATFGAVVAV FQWGWLGDLLGVDATGPVMSVLPVLLIGVLFGLAMDYQVFLVTRMREEYVHGRSPDEAMITGFKHGSRVVVAAALIMISV FAGFVLAESVLIQSIGFALAFGVAVDAFVVRMTIVPALMSLLGRSAWWLPRWLDRVLPNVDVEGEKLTRGTGGDGGSDGD RELEPLAR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CMM_0093 | YP_001220832.1 | RND family transporter | Not tested | chp/tomA region | Protein | 6e-84 | 47 |
| cur_1489 | YP_001800883.1 | RND superfamily drug exporter | Not tested | Not named | Protein | 3e-83 | 46 |
