|
Name : Huta_2472 (Huta_2472) Accession : YP_003131369.1 Strain : Halorhabdus utahensis DSM 12940 Genome accession: NC_013158 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 2546225 - 2547670 bp Length : 1446 bp Strand : + Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGATGGGAACCCAACTGCAGCGCGCACGCAACGGTGAGATCACGCCGGCGATGGAGCGCGTCGCCGAGCGGGAGAACCG TGATCCCGAGTACGTCCGCGAGAAGGTCGCCGCGGGCGAGGCAGTGATCCCGAACAACCACGAGCACGACTCGCTGGATC CGATGATTATCGGGAAGGACTTTTCGACGAAAGTCAACGCCAACATCGGCAACAGCGAACCCGAAAGCGATATCGAAACC GAACGGGAGAAACTCCACACGGCCGTCGAATACGGCGCGGACACGGTGATGGATCTCTCGACGGGTGGTGACATTCCGGA ACTTCGCGCCGGCCAGATCGAACACTCGCCGGTCCCGCTCGGGACAGTGCCGATCTACGAGGCGCTAAAGCAGGCCGGAT CACCCGAGGAACTCACGGCGGACCTCCTCCTGGACGTGATCGAGTCCCAGGCCGCCCAGGGCACGGACTATCAGACGATT CATGCGGGGGTTCTCCGGGAGCACTTGCCGCTGACCGACGGCCGGATCACGGGCATCGTCTCCCGCGGTGGGTCGATTCT CGCCGAATGGATGGAAAATCACGGCGAGCAGAACCCGCTGTACACGCATTTCGACGAGATCTGTGCGATCCTTGCGGAAT ACGACGTGACGATCAGTCTCGGCGACGGGCTCCGACCCGGGAGCCTGGCAGACGCCAACGACGACGCCCAGCTGGCGGAA CTGGAGACGCTGGGTGACCTCACCGAGCGCGCCCACGAGCACGGCGTCCAGGTCATGGTCGAGGGGCCGGGCCACGTCCC CCTAGACGAGATCGGCGAACAGGTCGAGTATCAACAGGAGGTCTGTGACGGCGCGCCGTTCTACCTGCTGGGCCCGCTGG TGACTGACGTTGCGCCGGGGTACGACCATATCACGAGTGCGATCGGCGCAACCGAGGCCGCCCGTCACGGCGCGGCGATG CTCTGCTACGTCACACCCAAAGAGCACCTCGGTTTGCCCGACGCCGAGGACGTCCGGGACGGGCTGGCGGCCTACCGGAT CGCCGCTCATGCGGGCGACGTGGCCGCCGGGAAGCCAGGCGCTCGCGACTGGGACGACGCGCTTTCCCAGGCGCGGTACA ACTTCGACTGGCGCGAGCAGTTCAACCTCGCGCTGGACCCCGACCGAGCCAAGGAGTATCACGACCAGACGCTCCCGGAG GACAACTACAAGGAAGCCCGCTACTGCTCGATGTGTGGCGCGGAATTTTGCTCGATGCGGATCGACCAGGACGCCCGTGA GGGGGAGGAGATGGAGGGACTGGACGCCGACGTCGATCTCGCGGACTCGCCCGCAGCCGACGTCAATCTGCCGCCGACGG GCAAACACGATACAAGTGGCCTGCCCACGGTGCCCGAGGCGTTGTGTGACCACGCCGGGGGCGAGGGTTTGCCGGGCGAC GACTGA Protein sequence : MMGTQLQRARNGEITPAMERVAERENRDPEYVREKVAAGEAVIPNNHEHDSLDPMIIGKDFSTKVNANIGNSEPESDIET EREKLHTAVEYGADTVMDLSTGGDIPELRAGQIEHSPVPLGTVPIYEALKQAGSPEELTADLLLDVIESQAAQGTDYQTI HAGVLREHLPLTDGRITGIVSRGGSILAEWMENHGEQNPLYTHFDEICAILAEYDVTISLGDGLRPGSLADANDDAQLAE LETLGDLTERAHEHGVQVMVEGPGHVPLDEIGEQVEYQQEVCDGAPFYLLGPLVTDVAPGYDHITSAIGATEAARHGAAM LCYVTPKEHLGLPDAEDVRDGLAAYRIAAHAGDVAAGKPGARDWDDALSQARYNFDWREQFNLALDPDRAKEYHDQTLPE DNYKEARYCSMCGAEFCSMRIDQDAREGEEMEGLDADVDLADSPAADVNLPPTGKHDTSGLPTVPEALCDHAGGEGLPGD D |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 9e-122 | 56 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 9e-122 | 56 |
