Gene Information

Name : Huta_1821 (Huta_1821)
Accession : YP_003130724.1
Strain : Halorhabdus utahensis DSM 12940
Genome accession: NC_013158
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 1826366 - 1827190 bp
Length : 825 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mem:Memar_2100 ABC transporter-related protein

DNA sequence : 
GTGACACTCACGATCGCAGACCTGCGGTTCAGCTACGACGCCGAGCCGGTCCTCTCGGCCGTTGATCTCTCGGTCGAGTC
GGGTGAACTGCTCGGACTGCTTGGCCCCAACGGCTCGGGCAAAAGCACGCTGTTGCAGTGTCTCAACGGGATTCTGGAGC
CGGACGCGGGAACGGTACGGATCGACGGTGATCCAGTGGCGAAACTGACCAGCGACGAGCGCGCCCGGCGGTGCAGTTAC
GTCCCGCAGGCCGAGTCGGGTGCGTTCCCGGCGACCGTCTTCGAGACCGTGATGCAGGGCCGACGACCCCACGGTGGGTG
GTCGCCGAGCGCACGCGACCGAGAGGCAACGGCGAGCGTCCTCGATCGGCTCGACATCGGGAATCTCGCCGATCGCCAGG
TCAGCGAGCTCAGCGGTGGCCAGCGCCAGAAGGTCCGTCTCGGGCGGGCACTGGTCGGCGATCCGTCGGTCACGTTGCTG
GACGAGCCGACGAGTGCGCTGGACCTCCGCCACCAGTTAGAGGTGATGGACCTCGTCGTCGAGCACATTCGAGCCAGCGA
AGTGGCCGGCATCGTCGCGATTCACGACCTCAACCTCGCCGCCCGGTACTGCGATCGGATCGCGCTGCTCGCAGACGGCG
AGATCCACGCCGTCGGGCCGCCCGAAGTCCTGACACCCGAGACGATCCGGACGGTCTACGGCGTCGAGGCGTCCGTCCGC
GGGCACCGCGACCGGCAGTTGATCGTGCCCGAAGCGCCGGCCGAGAAAACCCACACTGCGGAACAGTCTGCCCGACAGCG
CCAACCAGCATCGACCGACGACTGA

Protein sequence : 
MTLTIADLRFSYDAEPVLSAVDLSVESGELLGLLGPNGSGKSTLLQCLNGILEPDAGTVRIDGDPVAKLTSDERARRCSY
VPQAESGAFPATVFETVMQGRRPHGGWSPSARDREATASVLDRLDIGNLADRQVSELSGGQRQKVRLGRALVGDPSVTLL
DEPTSALDLRHQLEVMDLVVEHIRASEVAGIVAIHDLNLAARYCDRIALLADGEIHAVGPPEVLTPETIRTVYGVEASVR
GHRDRQLIVPEAPAEKTHTAEQSARQRQPASTDD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
irp6C YP_005124377.1 ATP-binding protein Irp6C Virulence Not named Protein 5e-28 43
irp6C NP_938506.1 ATP-binding protein Irp6C Not tested Not named Protein 4e-29 43
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-30 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Huta_1821 YP_003130724.1 ABC transporter BAC0164 Protein 7e-31 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Huta_1821 YP_003130724.1 ABC transporter VFG1042 Protein 6e-31 42