Gene Information

Name : Mefer_1128 (Mefer_1128)
Accession : YP_003128438.1
Strain : Methanocaldococcus fervens AG86
Genome accession: NC_013156
Putative virulence/resistance : Virulence
Product : XRE family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 1060021 - 1060215 bp
Length : 195 bp
Strand : +
Note : PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: slo:Shew_3627 XRE family transcriptional regulator

DNA sequence :
TTGAAAAACAGGTTGAGAGAGTTGAGAAAAGAGCATGGAATAACTCAGGAAGAGCTTGCTAAAGCTTTGGGAGTGACAAG
ACAGACGATAATAGCCATAGAGAAGGGGAAATACGACCCTTCCTTAAAACTTGCTTTGAAGATAGTAAAGTTTTTTGGAG
TAAAGGTGGAGGATGTTTTTGAGTTGGAGGAATAA

Protein sequence :
MKNRLRELRKEHGITQEELAKALGVTRQTIIAIEKGKYDPSLKLALKIVKFFGVKVEDVFELEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 1e-12 56
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 4e-09 50
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 3e-09 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mefer_1128 YP_003128438.1 XRE family transcriptional regulator VFG2175 Protein 1e-09 50
Mefer_1128 YP_003128438.1 XRE family transcriptional regulator VFG2168 Protein 1e-09 50