Gene Information

Name : Cpin_0776 (Cpin_0776)
Accession : YP_003120475.1
Strain : Chitinophaga pinensis DSM 2588
Genome accession: NC_013132
Putative virulence/resistance : Virulence
Product : KpsF/GutQ family protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0794
EC number : -
Position : 942049 - 943023 bp
Length : 975 bp
Strand : +
Note : KEGG: ppd:Ppro_0969 KpsF/GutQ family protein; TIGRFAM: KpsF/GutQ family protein; PFAM: sugar isomerase (SIS); CBS domain containing protein

DNA sequence :
ATGAAAAATAGAACGGTTATTAATATTGCTGAAGTGGCGAAAAGGACGCTGTCCCTCGAGGCAACAGCGATCTCCGACCT
GAAGCAATACATCAATGGTGATTTTGAAAAGGCGGTAGAGTGGATCGCGGAATGTGCCGGACGACTGGTAATTTCCGGGA
TAGGGAAAAGCGCTATCATCGGTCAGAAAATTGTTGCCACGCTGAATTCCACGGGAACCCCCGCTATTTTTATGCACGCA
GCAGATGCTATCCACGGAGATTTGGGTATGATCCAGCATGACGATATCATATTGTGTATTTCTAAGAGCGGTAATTCTCC
TGAAATAAAAGTACTGGTTCCGCTTGTGAAGAACTTTGGCAACAGATTGATTGCCATGGTCGGCAATACGGAGTCTTTTC
TGGCACGTGAAGCCCATCTTATCCTGAATACTTCAGTAGACCAGGAAGCCTGTCCAAATAATCTGGCGCCTACGACCAGC
ACGACTGCCCAATTGGCAATGGGGGATGCTTTGGCCGTATGTTTGATAGAATGGCATGGATTTTCTGCTGCTGATTTTGC
AAAAGTTCATCCGGGAGGTACACTGGGTAAAAAGCTGTATCTCAAGGTCGGAGACCTGAGTCGCCTCCACCAGGCGCCAC
AGGTGACAAAACAAAGTGCACTGAAAGAAGTGATCGTAGCCATCTCTTCCGGTATGCTGGGCGTTACCGCTGTACTGGAC
GCAGAAGGCTCACTGAGTGGAATCATCACTGACGGAGACCTTCGCCGTATGCTTGAAAAAGGCATTCCGGGCGAAAGTGT
CACAGCAGAAGTTATCATGTCAACGCATCCGAAGACGATCCAGGAAGACGAACTTGCGGTCAATGCACTCGAAATGATGC
GTCAACATGACATAACACAACTATTGGTTTTGAAAGATAAACGCTATATAGGTATCATTCATTTACATGATTTAATCAGG
GAAGGAATTATATAA

Protein sequence :
MKNRTVINIAEVAKRTLSLEATAISDLKQYINGDFEKAVEWIAECAGRLVISGIGKSAIIGQKIVATLNSTGTPAIFMHA
ADAIHGDLGMIQHDDIILCISKSGNSPEIKVLVPLVKNFGNRLIAMVGNTESFLAREAHLILNTSVDQEACPNNLAPTTS
TTAQLAMGDALAVCLIEWHGFSAADFAKVHPGGTLGKKLYLKVGDLSRLHQAPQVTKQSALKEVIVAISSGMLGVTAVLD
AEGSLSGIITDGDLRRMLEKGIPGESVTAEVIMSTHPKTIQEDELAVNALEMMRQHDITQLLVLKDKRYIGIIHLHDLIR
EGII

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsF AAZ04466.1 polysialic capsule transport protein Virulence PAI I APEC-O1 Protein 9e-58 46
kpsF CAE85210.1 KpsF protein Virulence PAI V 536 Protein 6e-58 46
kpsF YP_854329.1 polysialic acid capsule synthesis protein KpsF Not tested PAI I APEC-O1 Protein 2e-57 46