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Name : Cpin_6748 (Cpin_6748) Accession : YP_003126350.1 Strain : Chitinophaga pinensis DSM 2588 Genome accession: NC_013132 Putative virulence/resistance : Resistance Product : major facilitator superfamily protein Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2814 EC number : - Position : 8457231 - 8458511 bp Length : 1281 bp Strand : + Note : PFAM: major facilitator superfamily MFS_1; ABC transporter substrate-binding protein; KEGG: mmr:Mmar10_3032 major facilitator transporter DNA sequence : ATGCAAACAACCAAGCAGTCCGCCATTGGCTTTATTTTTATCACCCTTTTAATCGACGTAATGGGATGGGGCCTCATCAT CCCCGTTATGGCCGACCTTATTGCCCAGCTGAAGCACATACCGGTCAACCAGGCCAGTACCTATGGAGCGCTCCTGCTGT CTGTTTTTGCCATTACACAGTTCATCTTCGCTCCGGTAGTCGGCAACCTCAGCGATAAATATGGTCGTCGGCCAGTACTC CTGCTATCACTGCTGGGCTTCGGTATAGACTATATTATCCTGGCCCTCGCTCCTTCATATGGATGGCTTTTCATCGGTCG TGTTATCGCCGGTATGACCGGCGCCAGCTTCACTACCGCTACAGCCTATATTGCTGACGTGAGTATAGACGAAACTACCA GGGCCAAAAACTTTGGTATGATCGGCGCTGCCTTCGGCCTTGGTTTTGTGCTCGGTCCTGCACTGGGCGCCCTGCTCGCC CACTGGGGTATCAGAGCACCATTCTATGCAGCCGCAGTACTCTGTCTCCTGAACTGCCTGTACGGCTTCTTCCTGTTGCC GGAATCCCTCAAAAAAGAAAACCGCCGTCCTTTTCAGTGGTCCCGTGCCAATCCACTTGGATCATTAAAATTCCTGACTA CACACCCTGAGATCGGCGGACTCGCATTTGCCTTCTTCCTGATCTATCTTGGTGCTCAGTCTGTACAGGGTAACTGGAAC TTCTTCACCATTTACCGCTTCCAGTGGTCTGAGAAAATGGTCGGTATATCCCTCGCAATAGTAGGGGTACTCGTTGGCGC AGTGCAGGCAGGTCTTACCAGGATCATCATCCCCAAAATCGGTAATGAAAAAAGTATCTACCTCGGCTTATCACTATATT CACTCGGACTTGTATTATTTGCATTCGCCACACAAAGCTGGATGATGTTTGCCTTCCTTATTCCTTACTGTTTAGGGGGC ATTTGCGGACCATCACTCCAATCCGTGATCTCCGGTCATGTACCACCCAATCAACAGGGAGAACTACAGGGCGCACTGAC CAGTCTGATGAGTCTTACAACGATCGTTGGTCCGTTAATCATGAACGGTACTTTTGCTTATTTCACAACAGATAAAGCAC CCTTCTATTTCCCGGGTATCCACTTCCTGATCGGCGCAGTATGTATGTTGCTGAGTATCGTTATTACGAATAAAGTACTG ACAAGAGAGAAAAAGGATAACCCTGAACTGAGAAATGTGATTGCTGGCGCAGGAGATTTTAAAGATGCGCCAATGCATTG A Protein sequence : MQTTKQSAIGFIFITLLIDVMGWGLIIPVMADLIAQLKHIPVNQASTYGALLLSVFAITQFIFAPVVGNLSDKYGRRPVL LLSLLGFGIDYIILALAPSYGWLFIGRVIAGMTGASFTTATAYIADVSIDETTRAKNFGMIGAAFGLGFVLGPALGALLA HWGIRAPFYAAAVLCLLNCLYGFFLLPESLKKENRRPFQWSRANPLGSLKFLTTHPEIGGLAFAFFLIYLGAQSVQGNWN FFTIYRFQWSEKMVGISLAIVGVLVGAVQAGLTRIIIPKIGNEKSIYLGLSLYSLGLVLFAFATQSWMMFAFLIPYCLGG ICGPSLQSVISGHVPPNQQGELQGALTSLMSLTTIVGPLIMNGTFAYFTTDKAPFYFPGIHFLIGAVCMLLSIVITNKVL TREKKDNPELRNVIAGAGDFKDAPMH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tetA(A) | AGK07085.1 | TetA(A) | Not tested | SGI1 | Protein | 7e-51 | 44 |
| tetA(A) | ACK44537.1 | TetA(A) | Not tested | SGI1 | Protein | 7e-51 | 44 |
| tetA(A) | AGK07027.1 | TetA(A) | Not tested | SGI1 | Protein | 7e-51 | 44 |
| tetA | YP_006098396.1 | tetracycline resistance protein | Not tested | Tn2411 | Protein | 1e-50 | 44 |
| tet(G) | AAK02051.1 | tetracycline resistance protein | Not tested | SGI1 | Protein | 8e-44 | 43 |
| tetA(G) | ABZ01843.1 | TetA(G) | Not tested | SGI2 | Protein | 8e-44 | 43 |
| tetA(G) | AGK06974.1 | TetA(G) | Not tested | SGI1 | Protein | 8e-44 | 43 |
| tetA(G) | AGK07104.1 | TetA(G) | Not tested | SGI1 | Protein | 8e-44 | 43 |
| tetA | CAJ77034.1 | Tetracycline resistance protein | Not tested | AbaR1 | Protein | 7e-45 | 43 |
| tetA(A) | ACN81011.1 | TetA(A) | Not tested | AbaR5 | Protein | 5e-51 | 43 |
| tetA | CAJ77066.1 | Tetracycline resistance protein | Not tested | AbaR1 | Protein | 4e-51 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Cpin_6748 | YP_003126350.1 | major facilitator superfamily protein | Y19114.gene.p01 | Protein | 4e-50 | 44 |
| Cpin_6748 | YP_003126350.1 | major facilitator superfamily protein | NC_011586.7045189.p0 | Protein | 4e-49 | 44 |
| Cpin_6748 | YP_003126350.1 | major facilitator superfamily protein | NC_010410.6002612.p0 | Protein | 4e-45 | 43 |
| Cpin_6748 | YP_003126350.1 | major facilitator superfamily protein | AF133140.gene.p01 | Protein | 4e-45 | 43 |
| Cpin_6748 | YP_003126350.1 | major facilitator superfamily protein | X75761.gene.p01 | Protein | 6e-51 | 43 |
| Cpin_6748 | YP_003126350.1 | major facilitator superfamily protein | NC_010410.6002597.p0 | Protein | 2e-51 | 43 |
| Cpin_6748 | YP_003126350.1 | major facilitator superfamily protein | CP001485.1.gene2821. | Protein | 2e-51 | 43 |
| Cpin_6748 | YP_003126350.1 | major facilitator superfamily protein | AF534183.gene.p01 | Protein | 2e-51 | 43 |
| Cpin_6748 | YP_003126350.1 | major facilitator superfamily protein | AF133139.gene.p01 | Protein | 2e-41 | 41 |
| Cpin_6748 | YP_003126350.1 | major facilitator superfamily protein | AY264780.2.gene3.p01 | Protein | 1e-55 | 41 |
