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Name : Cpin_6302 (Cpin_6302) Accession : YP_003125908.1 Strain : Chitinophaga pinensis DSM 2588 Genome accession: NC_013132 Putative virulence/resistance : Unknown Product : RNA binding S1 domain-containing protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 7941005 - 7943287 bp Length : 2283 bp Strand : + Note : PFAM: RNA binding S1 domain protein; SMART: RNA binding S1 domain protein; Resolvase RNase H domain protein fold; KEGG: sfu:Sfum_1838 RNA binding S1 domain protein DNA sequence : ATGAATAGCAAACACATTGCGCTAATTTCAGCGGAGCTGAACATCTCAGCGCGACAAGCGGAGAACACCATGAATTTGCT GGCGGAAGGGTCGACCGTTCCGTTCATCAGCCGCTACCGTAAAGAAGTAACCGGTAGTCTGGATGAGGTACAGATCGGAA AGATCGAGGACCTGCAAAAACGCTACAAGGAAGTGGATGAACGCCGCGCTTTCATTATCAAAACCATTACAGATCAGGAG AAAATGACACCTGAGCTGCTTGGCAAAATTGAAGGCACCTGGGCACTCACCGAACTGGAAGATATTTATCTGCCTTATAA ACCGAAACGTAAGACCAGAGGTACACAGGCAATTGAGAAAGGTCTGGAACCACTGGCTAAACTGCTGTTCGAACAGCAGG AAGCTGCGCCGCTGACCGCTGCGGAAGGATTCCTGAACGAACAGGTAGCTTCTACCGACGAGGCACTGAAAGGCGCCCGT GATATCATGGCAGAGTGGATCAATGAAAATGCCGAGGTACGTGACAAACTGCGTAAGCTCTTCACCCATACTTCCGTGCT GACATCCAAAGTAATAGAAGGAAAAGAAGAAGAAGGCGCCAAATACAAAGACTATTTCGATTTCAGCGAAGAGATCCACG CGATCCCTTCTCACAGAGCCCTGGCGATCCTCCGTGGAGAATCTGAAGGCTTCCTGTATGCAACGATCAATCCGGCAGAA GAAGATGCATCTGAGATCATCAACAAACAATTTGTAACCGGCAATAACGAAAGCAGCAAACAGGTAGAAAAAGCAGCCGC TGATGCTTACAAACGCCTGTTGCGCCCATCCCTGGAAAACGAATTCCGTGCGCTGACCAAAGAGAAATCTGATGCAGAGG CCATCGAGGTATTCGCAGAAAACCTCCGTCAGTTACTGCTGGCGGCACCCCTGGGACCTAAGGCAGTAATTGCGATTGAT CCGGGTTACAGAACTGGTTGTAAAGTGGTAGCACTGGATAACCAGGGTAACATGCTGGACAATGACGTTATTTATCCACT GGAAAAGAACTATAAAAGAGATGATGCTGAAGCCCTGCTGAAAAAATGGGTTGACAAATATGACACTGCCGCTATTGCCG TGGGTAATGGTACTGCAGGTCGTGAAACGGAGGAGTTCGTAAAGAAACTTGACTTTGGTAAAAAAGTGAACGTATTCATG GTAAACGAGAGCGGTGCTTCCGTTTATTCTGCTTCTGAAGTGGCAAGGGAAGAATTTCCTGACTTTGATGTAACCGTTCG TGGTGCCGTATCTATCGGCCGCAGACTGATCGATCCGCTGGCTGAACTGGTGAAAATCGATCCGAAAGCGATCGGTGTAG GTCAGTACCAGCACGATGTGAACCAATCCAGCCTGAAACAGAGCCTGGACAGAGTGGTTATAAGCTGCGTGAATAATGTA GGCGTAAACCTGAATACAGCGTCAAAACACCTGCTGGCGTATGTATCCGGTCTGGGACCTTCCCTGGCGGAAAACATCGT GAAATACCGCAAAGAAAACGGTGCATTCAAAAACCGTACGCAGCTGAAGAAAGTAACCCGCCTGGGTGATAAAGCATTCG AACAATGTGCGGGCTTCTTACGTATCGAAAATGGTGATAACCCGCTGGATAACTCCGCAGTACACCCTGAGCGTTATTCC CTGATCGAAAACATGGCTGCCAAACAGTCCTGTACTGTTCAGGACCTGATGGCGAAAGAGGAACTGCGTAAGAAAATTAA TGCGAAAGAATATGTAAGCGAAGAAGTTGGTCTGCTGACCCTGGAAGATATCCTGAAAGAGCTGGACAAACCAAGCCGTG ACCCTCGTGACGAGATCGCTATCTTTGAATATGCCGAAGGTATTCACAAAATGGAAGACCTGAAAGTAGGTATGACACTG CCAGGCGTAGTGACCAACATTACCAACTTCGGTGCATTTGTGGATATCGGGGTAAAACAGGACGGTCTGGTACACATATC TCACCTGAGCAACCGCTTTATCAGCAACCCTAACGAAGCGGTAAAACTGAACCAGAAAGTAACAGTTACTGTACTGGAGG TGGATCCTTCCCGTAAGCGTATTTCTCTGTCTATGAAAGACAATGAAGCGCCACAGGCAGGCAGCGGACAGCGCAGAGAA AGAAGAGAAGGTGGTAACAACAACAACAGCAACAGTAGTAACAGGAATGCCAAACAGGGTGCACCAGCGCCGCTGAATGA TTTCCAGGCGAAACTGGCTGAGCTGAAGAAGAAGTTCAACTAA Protein sequence : MNSKHIALISAELNISARQAENTMNLLAEGSTVPFISRYRKEVTGSLDEVQIGKIEDLQKRYKEVDERRAFIIKTITDQE KMTPELLGKIEGTWALTELEDIYLPYKPKRKTRGTQAIEKGLEPLAKLLFEQQEAAPLTAAEGFLNEQVASTDEALKGAR DIMAEWINENAEVRDKLRKLFTHTSVLTSKVIEGKEEEGAKYKDYFDFSEEIHAIPSHRALAILRGESEGFLYATINPAE EDASEIINKQFVTGNNESSKQVEKAAADAYKRLLRPSLENEFRALTKEKSDAEAIEVFAENLRQLLLAAPLGPKAVIAID PGYRTGCKVVALDNQGNMLDNDVIYPLEKNYKRDDAEALLKKWVDKYDTAAIAVGNGTAGRETEEFVKKLDFGKKVNVFM VNESGASVYSASEVAREEFPDFDVTVRGAVSIGRRLIDPLAELVKIDPKAIGVGQYQHDVNQSSLKQSLDRVVISCVNNV GVNLNTASKHLLAYVSGLGPSLAENIVKYRKENGAFKNRTQLKKVTRLGDKAFEQCAGFLRIENGDNPLDNSAVHPERYS LIENMAAKQSCTVQDLMAKEELRKKINAKEYVSEEVGLLTLEDILKELDKPSRDPRDEIAIFEYAEGIHKMEDLKVGMTL PGVVTNITNFGAFVDIGVKQDGLVHISHLSNRFISNPNEAVKLNQKVTVTVLEVDPSRKRISLSMKDNEAPQAGSGQRRE RREGGNNNNSNSSNRNAKQGAPAPLNDFQAKLAELKKKFN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 2e-156 | 49 |
