Gene Information

Name : Cpin_6114 (Cpin_6114)
Accession : YP_003125724.1
Strain : Chitinophaga pinensis DSM 2588
Genome accession: NC_013132
Putative virulence/resistance : Resistance
Product : arsenic resistance protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0798
EC number : -
Position : 7713079 - 7714146 bp
Length : 1068 bp
Strand : +
Note : TIGRFAM: arsenic resistance protein; PFAM: bile acid:sodium symporter; KEGG: dar:Daro_2636 arsenic resistance protein ACR3

DNA sequence :
ATGTCTGCAAACAACTGTTATCCTGCACATGAGCGGAAGCGACTTGGTTTCCTGGACCGCTTTCTTACTTTATGGATCTT
TGTAGCTATGGCAATAGGTGTTGGTATCGGTTATTTTATTCCCGGAACAGACACATTTATACATTCATTCTCTTCGGGGA
CCACCAATATCCCGTTGGCTACAGGACTTATTCTGATGATGTATCCGCCACTGGCAAAAGTTAAATATGAACAGATAGGA
AGAGTGTTTGGCAATGTGAGGGTATTAAGTGTCTCGCTGTTGCTCAACTGGGTGGTAGGTCCGATATTAATGTTTGCACT
CGCGCTGCTGTTTCTGCATAATTACCCGGAGTATATGACCGGACTGATATTAATAGGATTGGCGCGCTGTATTGCAATGG
TCATTGTATGGAATGAACTTGCGGATGGAAGCAGGGAATATGCGGCAGGACTTGTTGCACTGAACAGTATTTTCCAGGTG
CTTTTATATAGTGTCTATGCTTATTTCTTTCTAACGGTGTTACCTCCGGTGTTCGGATATCAGGGATTGGCTATCCACAT
CTCTATCGGACAGATAGCGGAGAGTGTGGCTATTTATCTGGGTATTCCTTTCGCAGCTGGTATTATAAGCAGATACCTGC
TTTTACAGTTAAAAGGCGAAGTATGGTATCAACAGAAGTTTATACCGGCGATCTCTCCTATTACCCTGATTGCCTTATTA
TTTACAATCATACTCATGTTCAGTCTCAAAGGCGCATTGATAGTGCAGATACCTGGCGATGTACTGCGTATTGCCTTACC
ACTGGTTATCTATTTTGCCATCATGTTTCTGCTCAGTTTTTTCGCAGGAAAATTCATGGGGGCGAATTATTCGGAAAATG
CAGCCATCTCATTTACAGCAACAGGTAATAACTTTGAGTTAGCGATAGCGGTTGCTATAGGAGTATTTGGTATCAATTCA
GGACAAGCATTTGCCGGTGTAATCGGTCCGCTGGTAGAAGTACCCGCATTGATCGCGCTCGTAAATATTGCATTCAGATT
ACGCAGGAGGTATTATCCGGCGCAATAG

Protein sequence :
MSANNCYPAHERKRLGFLDRFLTLWIFVAMAIGVGIGYFIPGTDTFIHSFSSGTTNIPLATGLILMMYPPLAKVKYEQIG
RVFGNVRVLSVSLLLNWVVGPILMFALALLFLHNYPEYMTGLILIGLARCIAMVIVWNELADGSREYAAGLVALNSIFQV
LLYSVYAYFFLTVLPPVFGYQGLAIHISIGQIAESVAIYLGIPFAAGIISRYLLLQLKGEVWYQQKFIPAISPITLIALL
FTIILMFSLKGALIVQIPGDVLRIALPLVIYFAIMFLLSFFAGKFMGANYSENAAISFTATGNNFELAIAVAIGVFGINS
GQAFAGVIGPLVEVPALIALVNIAFRLRRRYYPAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB ADZ05767.1 arsenic resistance protein Not tested AbaR11 Protein 4e-68 60
arsB AFC76433.1 ArsB Not tested AbaR5 Protein 9e-90 59
arsB CAJ77016.1 transmembrane protein of arsenate pump Not tested AbaR1 Protein 7e-90 59

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cpin_6114 YP_003125724.1 arsenic resistance protein BAC0573 Protein 3e-95 62
Cpin_6114 YP_003125724.1 arsenic resistance protein BAC0004 Protein 1e-70 51