Gene Information

Name : Cpin_6113 (Cpin_6113)
Accession : YP_003125723.1
Strain : Chitinophaga pinensis DSM 2588
Genome accession: NC_013132
Putative virulence/resistance : Resistance
Product : protein tyrosine phosphatase
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0394
EC number : -
Position : 7712659 - 7713075 bp
Length : 417 bp
Strand : +
Note : PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; KEGG: pca:Pcar_1772 protein-tyrosine-phosphatase

DNA sequence : 
ATGAAAAGAATTCTGGTGCTCTGTACCGGCAACAGCTGTCGTAGTCAGTTAGCAGAAGGCTACCTGAGACATTTTGCAAA
AAACAAGGCCGAGATCTATAGTGCCGGCGTGGAAACACATGGCGTTAATCCCCGTGCCATTGCCACCATGCAGGAAGATG
GGATAGATATTTCGGGACATACCTCCAACAATATGGAAGAATACAGGGACATTGATTTTGACTATGTCATCACTGTCTGT
GATAATGCAAAAGAACGCTGTCCTTATTTTCCGGGTAAAGCGCTCAAGTTTCATTATAACTTCCCGGATCCGGCAAAAGC
TACTGGCAGTGAAGAGGTTATTATGGAACAATTCAGACTGGTACGGAAACAGATAAAGCAATATTGCAGCGATTTCATTC
AGCAACATATTTCCTGA

Protein sequence : 
MKRILVLCTGNSCRSQLAEGYLRHFAKNKAEIYSAGVETHGVNPRAIATMQEDGIDISGHTSNNMEEYRDIDFDYVITVC
DNAKERCPYFPGKALKFHYNFPDPAKATGSEEVIMEQFRLVRKQIKQYCSDFIQQHIS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsC YP_252016.1 arsenate reductase Not tested SCCmec Protein 2e-18 48
arsC YP_252023.1 arsenate reductase Not tested SCCmec Protein 2e-19 45
arsC YP_005754064.1 arsenate reductase Not tested Type-XI SCCmec Protein 1e-18 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cpin_6113 YP_003125723.1 protein tyrosine phosphatase BAC0032 Protein 4e-19 46
Cpin_6113 YP_003125723.1 protein tyrosine phosphatase BAC0580 Protein 5e-20 45
Cpin_6113 YP_003125723.1 protein tyrosine phosphatase BAC0581 Protein 5e-21 45