Gene Information

Name : Cpin_6110 (Cpin_6110)
Accession : YP_003125720.1
Strain : Chitinophaga pinensis DSM 2588
Genome accession: NC_013132
Putative virulence/resistance : Unknown
Product : alanine racemase
Function : -
COG functional category : R : General function prediction only
COG ID : COG0325
EC number : -
Position : 7710512 - 7711246 bp
Length : 735 bp
Strand : -
Note : PFAM: alanine racemase; KEGG: sml:Smlt2931 racemase

DNA sequence :
ATGAAAGAAACCATCATCAATAACCTTCATACCGTTCACAACCGCATCGCACACGCCTGTGAAAAATCCGGCAGGAATCC
GGCAGATGTCCGGCTTTTATTGGCTACCAAAACAGTTTTTCCTGAATACATCCGCATCGCTATCGAAGCTGGTGAACGGC
TGATCGGAGAGAATAAAGTACAGGAGTTCCGTGATAAACACGAAGCCCTTTCTGATCTTTCTGTTGAAAGACACTTTATT
GGTCACCTGCAACATAACAAGGTAAAAGATGTCCTGAAATACGTTTCCTGTGTCCAGTCCCTCGACAGGCTATCTATCGC
ACAGGAACTGGACAAACGACTGCAACAGGAGGGGAGAAATCTCGACGTTTTTATCCAGGTAAATACTTCTTATGAAGAAA
GTAAATTCGGTTTGCAGCCTGCTGACGTAGCCGGTTTTATCCGAGAGTTGAAATCACTGGATACACTACAGGTTAAAGGC
TTGATGACCATCGGTCTCCTTGATGTAGACAGAGAAAAAATGCGCCCGTCACTCACCTTGCTCCGGCAGACCAGGGAACA
GCTTATCGCAGCTGGTATTGAAAATAGTGATCAGTTCAAATTATCAATGGGTATGTCCCAGGATCTCGATATGGCGATAG
CGGAAGGCGCTGATATCGTTCGTGTAGGTACTGCCATCTTTGGAAATCGCGTGATTGGAAAAGAGATCTGGAATGAAAGT
GAAGCAGAAAAGTAA

Protein sequence :
MKETIINNLHTVHNRIAHACEKSGRNPADVRLLLATKTVFPEYIRIAIEAGERLIGENKVQEFRDKHEALSDLSVERHFI
GHLQHNKVKDVLKYVSCVQSLDRLSIAQELDKRLQQEGRNLDVFIQVNTSYEESKFGLQPADVAGFIRELKSLDTLQVKG
LMTIGLLDVDREKMRPSLTLLRQTREQLIAAGIENSDQFKLSMGMSQDLDMAIAEGADIVRVGTAIFGNRVIGKEIWNES
EAEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpfrc_01564 YP_003783964.1 hypothetical protein Not tested PiCp 6 Protein 1e-31 42
CpI19_1562 YP_005686005.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 1e-31 42
Cp1002_1555 YP_005681817.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 1e-31 42
CpC231_1557 YP_005683917.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 1e-31 42