Gene Information

Name : Cpin_5844 (Cpin_5844)
Accession : YP_003125464.1
Strain : Chitinophaga pinensis DSM 2588
Genome accession: NC_013132
Putative virulence/resistance : Unknown
Product : catalase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0753
EC number : -
Position : 7424958 - 7426439 bp
Length : 1482 bp
Strand : +
Note : PFAM: catalase domain protein; KEGG: bbr:BB4994 catalase

DNA sequence :
ATGTCTGAGCAGAAGAAGCTGACCACAGCCTCCGGCATTCCTTATTTCGAACACGAAAATTCAATGACCGCAGGTCCCAG
AGGTCCGATATTGCTGCAGGATTTTATTCTCCATGAAAAGATGGCGCATTTCAACAGAGAGCGTATTCCTGAGAGAGTCG
TACACGCAAAAGGAAGCGGTGCCTATGGTACATTTACCGTTACCCACGACATCGCCGCGTTTACAAAAGCAAAGATATTT
GACACCATTGGCAAACAGACGCGCGTGTTCGTTCGCTTCTCGACTGTAGGTGGAGAAAAAGGATCGGCAGACAGTGAGCG
TGATCCGCGTGGATTTGCCGTAAAATTCTACACAGAAGAAGGTAACTGGGATCTTGTAGGTAACAACACACCTATCTTTT
TCATTAAAGATCCGAAGAAGTTCAGCGACTTCATTCACACACAAAAGCGTGATCCGCGTACAAACACCAAGAGCGCGACA
ATGGTATGGGACTTCTGGAGCCTTAATCCTGAGAGCCTGCACCAGGTACTGATCCTGATGAGTGACAGAGGTACGCCCAT
CAGCTATCGTCACATGCATGGATTCGGTAGCCATACCTTCTCTTTCCTGAATAAAGACAATGAGCGCTTCTATGTGAAGT
TCCACTTCATCACCGAACAGGGAATTAAAAACTTCACCAATGAGGAAGCAGCAGAGATGCGTGGTAAAGATCCGGATCAG
GCGCAACGTGACCTGGTTGAATCGATTGATAAAGGTGATTTCCCAAGATGGAAACTGAAAGTACAAATCATGCCGGAAGC
GGATGCAAAGACTTACCGCTGGAATCCTTTTGACCTGACGAAAGTATGGCCACATGCGGATTATCCATTGATCGATGTTG
GTGTGATGGAACTGAATGAGAATCCTGACAACTATTTCGCTCACGTAGAACAGGCTGCATTTGCACCGGCGCACGTAGTG
GATGGTATCGGCTATTCTCCGGATAAAATGTTACAGGGCCGCCTGCTCTCCTACCCTGATGCACATCGTTATCGCCTGGG
CGTAAACTATGAGCAGATACCGGTGAACAGATGTCCGTTTGCTGTCAATAACTATCACCGTGATGGCGCTATGCGCGTAG
ATGGTAATGGTGGTAGCCATCCGAATTACTTCCCTAACAGCTTTGGCAATATCGCACCTGATCCTGCATACAAAGAACCA
GGTATGCCATTGGATTCACTGTTTGCTGACTGGTATGACCGTAATGCAGATGGGGAAAATGACCATTATACACAGCCGGG
TAACCTGTTCCGCCTGATGACAGCCGAAGAAAAGAAAAAGACAATCAGCAATATTGTAGGCGCAATGAGTGGTATTGAAG
GACACAAAAGAGAGGAAATTATTAACCGCCAGTTATGCCACTGGTTCCGTGCAGACCTCCAGTTAGGGATGGGTATCGCA
CAGGGACTGGGCGTATCGGTAGATGCAATGGCAACACATTAA

Protein sequence :
MSEQKKLTTASGIPYFEHENSMTAGPRGPILLQDFILHEKMAHFNRERIPERVVHAKGSGAYGTFTVTHDIAAFTKAKIF
DTIGKQTRVFVRFSTVGGEKGSADSERDPRGFAVKFYTEEGNWDLVGNNTPIFFIKDPKKFSDFIHTQKRDPRTNTKSAT
MVWDFWSLNPESLHQVLILMSDRGTPISYRHMHGFGSHTFSFLNKDNERFYVKFHFITEQGIKNFTNEEAAEMRGKDPDQ
AQRDLVESIDKGDFPRWKLKVQIMPEADAKTYRWNPFDLTKVWPHADYPLIDVGVMELNENPDNYFAHVEQAAFAPAHVV
DGIGYSPDKMLQGRLLSYPDAHRYRLGVNYEQIPVNRCPFAVNNYHRDGAMRVDGNGGSHPNYFPNSFGNIAPDPAYKEP
GMPLDSLFADWYDRNADGENDHYTQPGNLFRLMTAEEKKKTISNIVGAMSGIEGHKREEIINRQLCHWFRADLQLGMGIA
QGLGVSVDAMATH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
katA ABD94664.1 catalase isozyme A Not tested ExoU island A Protein 1e-134 61
katA YP_005126717.1 catalase Not tested Not named Protein 5e-100 47
katA YP_005680448.1 catalase Not tested PiCp 3 Protein 2e-96 45
katA YP_005682539.1 catalase Not tested PiCp 3 Protein 2e-96 45
katA YP_003782575.1 catalase Not tested PiCp 3 Protein 2e-96 45
katA YP_005684630.1 catalase Not tested PiCp 3 Protein 2e-96 45