|
Name : Cpin_5731 (Cpin_5731) Accession : YP_003125353.1 Strain : Chitinophaga pinensis DSM 2588 Genome accession: NC_013132 Putative virulence/resistance : Unknown Product : short-chain dehydrogenase/reductase SDR Function : - COG functional category : R : General function prediction only COG ID : COG4221 EC number : - Position : 7293081 - 7293821 bp Length : 741 bp Strand : - Note : PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rle:RL2941 short-chain dehydrogenase/oxidoreductase DNA sequence : ATGGAAAACAATGTAACAGGAAAAGTAGTGTTAATAACAGGTGCGAGTAGTGGCATTGGTGAGGCAACTGCCTTATTGCT GGCAGAGAAAGGAGCAAAGGTGGTACTTGGCGCCAGAAGGGAAGATAGATTACAGGCATTGGCGGCACGTATTATAGCAG CAGGCGGAGCCGTGATCTATGCCGTGACGGATGTAAAGAAACGAGCTGACCTCACAGCCCTGGTCAGTCTGGCACTTGCA CATTTCGGCCGACTGGACGTACTGATAAATAATGCCGGTATCGCTTCCTTATCACCTATGGATCATGTCACAGTGGATGA ATGGGATGAAATGATTGATGTGAACATCCGGGGTGTATTACATGGAATAGCGGCGGGACTGCCGGTTTTTCGTCAACAGA AAAGCGGGCATTTTATCAATGTCGCTTCTACAGCAGGACTGAAGATCATACCAAACATGGGCGTATATGCGGCTACTAAA TCGGCGGTCAGGTTTATTTCAGAAGGACTGCGGCAGGAGGCAGGCCCTGATCTTAGAGTTACGGTGATTTCACCCGGATA TACCCAGACTGAGTTAGGTAACGGTATGTCCAACCAGGAGCTGAGAGCACAGACTGCTGCAGGTATGGAAAAGATGGCCA TTGCTCCGGGAGCCATCGCGGCAGGTATTTTGTATGCTATTGAACAGCCGGCAGCAGTCGATGTGAATGAACTCGTTATT CGCCCCACTGCACAGGCATAG Protein sequence : MENNVTGKVVLITGASSGIGEATALLLAEKGAKVVLGARREDRLQALAARIIAAGGAVIYAVTDVKKRADLTALVSLALA HFGRLDVLINNAGIASLSPMDHVTVDEWDEMIDVNIRGVLHGIAAGLPVFRQQKSGHFINVASTAGLKIIPNMGVYAATK SAVRFISEGLRQEAGPDLRVTVISPGYTQTELGNGMSNQELRAQTAAGMEKMAIAPGAIAAGILYAIEQPAAVDVNELVI RPTAQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAC20627.1 | hypothetical protein | Not tested | Internalin | Protein | 3e-39 | 49 |
| adh | CAI59964.1 | short-chain dehydrogenase | Not tested | LIPI-2 | Protein | 2e-42 | 48 |
