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Name : Cpin_0503 (Cpin_0503) Accession : YP_003120202.1 Strain : Chitinophaga pinensis DSM 2588 Genome accession: NC_013132 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 600943 - 602457 bp Length : 1515 bp Strand : + Note : TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); tRNA synthetase class II (G H P and S); nucleic acid binding OB- fold tRNA/helicase-type; KEGG: gsu:GSU2271 lysyl-tRNA synthetase DNA sequence : ATGACACAATTATCCGAGCAAGAGATCATACGCAGGGAGAAACTGCAGGAACTGGAGAAACTGGGCATCAACCCTTATCC GGCGGAAAAATATCCGGTGAACAATACAGCTGCCAATATAAAGGCCCTGTATACGGAGGAAACCAAAGACCAGTTCCAGG ATATATGTCTGGCTGGCCGTATTATGGCTGTACGTGACATGGGTAAGGCGGCTTTTGTGAAGTTACAGGACCATACTACA CAGATGCAGCTGTACATTCGTCGTGACGATATCTGCAATGGCGATGACAAGACAATGTTCGACGTCGTATTCAAGAAATT ACTTGATCTGGGCGATATTATCGGTGTGAAAGGTTATGCCTTCATCACCAAAACCGGGGAATTATCTATCCACGTTACCA AACTGGATGTCCTGGCTAAATCTATCCGTCCGTTACCGGTGGTACGTGAGAAAGAAGGAGAAGTGTTTGATGCCGTAACT GATCCGGAGTTCAAATACCGTCAGCGTTACGTAGACCTGATCGTGAATCCGCAGGTGAAGGAAGTTTTCATCAAACGTAC CCGCATCATGCAGACCATCCGTGATTTCTATAACGACCTGGGTTACCTGGAAGTAGAAACACCTATCCTGCAGCCTATTC CTGGTGGTGCTACCGCACGTCCGTTCACCACACACCATAACGCGCTGGATATTCCTTTATACATGCGTATTGCGAATGAA CTGTACCTGAAACGCCTGATCGTGGGTGGTTTTGAAGGTGTATATGAATTTGCGAAAGACTTCCGTAACGAGGGTATGGA CCGTACCCACAACCCGGAATTCACCGTAATGGAAATGTACGCTGCGTACAAAGACTACGAGTGGATGATGGATACCACCG AAACCCTCCTGGAAAAGATCGCGATTGCCCTCCATGGTACTACCGAAGTAACAGTAGGTGAAAAAGTGATCAACTTCAAG GCGCCTTTCCGCAGAGTAACCATGTATGAAGCGATCCTGGAACATACCGGTATCGATGTGAGCAACATGGATGAAGATCA GCTGCGCGCTACCTGTGTACAACTGGGTATCTATGTGAAACCTAGCATGGGTAAAGGCAAACTGATTGACGAGATCTTCG GCGAGAAATGTGAACACCACTACGTACAGCCTACCTTTATCACCGATTATCCGGTGGAAATGAGTCCGCTGACCAAAAAG CACCGTAGCAAACCAGGTCTGGTAGAACGCTTCGAACTGATGGTAAACGGTAAAGAGCTGGCAAACGCGTACAGTGAGCT GAACGACCCGATCGATCAGCGCGCCCGCTTCGAAGATCAGGTGAAACTGATGGAACGTGGTGATGACGAAGCCATGTACA TCGACTACGACTTCCTGCGTGCACTGGAATACGGTATGCCGCCAACCTCGGGTATCGGTATTGGTATTGACCGTCTGACC ATGATCATGACCAATCAGCCGTCCATCCAGGATGTACTGTTCTTCCCTCAGATGAAACCTGAGAAAACAGCATAA Protein sequence : MTQLSEQEIIRREKLQELEKLGINPYPAEKYPVNNTAANIKALYTEETKDQFQDICLAGRIMAVRDMGKAAFVKLQDHTT QMQLYIRRDDICNGDDKTMFDVVFKKLLDLGDIIGVKGYAFITKTGELSIHVTKLDVLAKSIRPLPVVREKEGEVFDAVT DPEFKYRQRYVDLIVNPQVKEVFIKRTRIMQTIRDFYNDLGYLEVETPILQPIPGGATARPFTTHHNALDIPLYMRIANE LYLKRLIVGGFEGVYEFAKDFRNEGMDRTHNPEFTVMEMYAAYKDYEWMMDTTETLLEKIAIALHGTTEVTVGEKVINFK APFRRVTMYEAILEHTGIDVSNMDEDQLRATCVQLGIYVKPSMGKGKLIDEIFGEKCEHHYVQPTFITDYPVEMSPLTKK HRSKPGLVERFELMVNGKELANAYSELNDPIDQRARFEDQVKLMERGDDEAMYIDYDFLRALEYGMPPTSGIGIGIDRLT MIMTNQPSIQDVLFFPQMKPEKTA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 4e-101 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Cpin_0503 | YP_003120202.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 2e-101 | 45 |
