Gene Information

Name : Cpin_4962 (Cpin_4962)
Accession : YP_003124596.1
Strain : Chitinophaga pinensis DSM 2588
Genome accession: NC_013132
Putative virulence/resistance : Unknown
Product : ABC transporter
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1125
EC number : -
Position : 6208322 - 6209308 bp
Length : 987 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: spe:Spro_1447 ABC transporter-related protein

DNA sequence : 
ATGATAAAGCTTGAACGTGTCAACAAATCTTTTCAGAACGGCAAGCCTGCTGTCAGTGATGTGTCTTTCGAGGTCAATAC
AGGAGAAACCCTCGTACTGCTGGGTACCAGCGGAAGCGGGAAGACCACTACCCTACGCATGATCAACAGACTCATAGCAC
CCGATAGCGGAAAAATATATGTGAATGGAGAGGCAGTGACCAACCAGGAGACCACTTCACTTCGTCGTAATATCGGCTAT
GTCTTGCAGGATAATGGATTGTTTCCGCACTACACGGTCGCAGAAAATATCGGTATTGTCCCCTCTTTACTCAAATGGGA
TAAAAAACGCATAGAAGAAAGGACCCGTACACTGATGGAAAAATTGCATCTCCCTCCCACCGAGTATTATCATGCTTATC
CGCAACAACTCAGCGGCGGACAACAGCAACGTGTCGGACTTGCCCGTGCCCTCGCAGCAGATCCCCCGGTATTACTGATG
GATGAACCTTTTGGTGCACTGGATCCCGTAACGAGAGCCAGTGTCAGAAAAGAATTCCGCTCACTTGACGAGATCAGCAA
TAAAACCGTCATCATGGTCACACACGATGTACAGGAAGCCTTTCAACTGGGCGACCGTATCTGCCTCATGGATAAAGGAA
CCATTCAGCAGACCGGCACGCCGGCCGAACTACTGTTCGCTCCCGCCAATGATTTTGTTATACACTTTTTCCAGGAGCAA
CGTCTGCTGCTGGAATTGAATGCAGTGAAACTGTCAGATATCCGCACGTTACTGCCGACAGACCATGTGACGGAAAAAGG
TTCGCCTATATTACCGGAAGACGCCTCCTGCTGGGATGCCTTAGAGCAGATGACCACGCTCTCCAAACCCGTGTATTATT
CTTTTGATGGCAAGCTCATTCGCATAGACAGCGCCGCGTTGATGCAGGCATTTACACAATACAAGCAAACTATCAGCAGC
AATGGAAGATCAACCCGGCTTTCCTGA

Protein sequence : 
MIKLERVNKSFQNGKPAVSDVSFEVNTGETLVLLGTSGSGKTTTLRMINRLIAPDSGKIYVNGEAVTNQETTSLRRNIGY
VLQDNGLFPHYTVAENIGIVPSLLKWDKKRIEERTRTLMEKLHLPPTEYYHAYPQQLSGGQQQRVGLARALAADPPVLLM
DEPFGALDPVTRASVRKEFRSLDEISNKTVIMVTHDVQEAFQLGDRICLMDKGTIQQTGTPAELLFAPANDFVIHFFQEQ
RLLLELNAVKLSDIRTLLPTDHVTEKGSPILPEDASCWDALEQMTTLSKPVYYSFDGKLIRIDSAALMQAFTQYKQTISS
NGRSTRLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 2e-44 51
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 8e-45 51