Gene Information

Name : Cpin_0494 (Cpin_0494)
Accession : YP_003120193.1
Strain : Chitinophaga pinensis DSM 2588
Genome accession: NC_013132
Putative virulence/resistance : Resistance
Product : cystathionine gamma-synthase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : -
Position : 592267 - 593406 bp
Length : 1140 bp
Strand : +
Note : PFAM: Cys/Met metabolism pyridoxal-phosphate- dependent protein; KEGG: mxa:MXAN_2035 Cys/Met metabolism PLP- dependent enzyme

DNA sequence :
ATGAAGCTGGGAACTAAACTTATACACGCAGGCGTTACCCCTGATCCTTCAACCGGGGCAATCATGACCCCGATCTTTCA
GACGTCCACGTATGTGCAGAACGCACCGGGCGACCATAAAGGATATGAATATGCCCGCACGCAAAACCCCACCCGTGATG
CGTTACAGAATGCACTGGCAGCCATCGAAAACGGCAAATACGGTATTTCCTTTGGTAGTGGTCTGGCTGCTACTGACGCA
GTCATGAAACTGCTGCAACCTGGCGATGAAGTCATTGCCTCCAACGATCTCTATGGCGGCACGTATCGCATATTTACCAA
GATATTCGAACGCTACGGCATTAAGTTCCATTTCATTGGTATGCAGGACGCCGAAAACATCCGGCAGTATGTCAACAAAA
ACACAAAACTGCTCTGGATAGAAACACCGACCAATCCGCTGCTGAATATCATTGATATCGCCGCCAGCGCAAAGATTGCA
AAGGAAAACAAGCTGCTGCTTTGTGTAGATAATACCTTCGCCTCTCCATACCTGCAAAACCCACTGGACCTGGGCGCAGA
TATCGTCGTACACAGCGCTACCAAATATCTCGGTGGTCATAGCGATGTGGTACACGGCGCAATTGTGGTAAAAGAAGAAG
CACTGGCAAAACAACTCTATTTCATACAGAACAGCTGTGGCGCAGTACCTGGTCCGCAGGACTGCTTCCTTGTATTACGC
GGACTCAAAACCCTGCACGTACGTATGCAGCGTCATTGTGAAAATGGCGCTGTTATCGCACAGTTCCTTCGCCAGCATCC
GAAAGTGGCCAAAGTGCATTGGTGCGGATTCGAAGATCATCCAAACCATCACATCGCCAAACAGCAGATGAGAGGCTTCG
GCGGTATGATCTCTTTCACCCTGAAAGATGACAGCCAGGAAGCTGCCTTTAAAGTACTGAGCGGCACCCACCTGTTCTCC
CTCGCAGAATCGCTGGGAGGAGTGGAGTCGCTCATAGGACACCCGGCCAGTATGACTCATGCCTCTATTCCCCGCGAAGA
AAGGATCGCCAACGGACTGGTAGATTCCCTGATCCGATTGAGTGTAGGTATTGAAGATGCAGAAGATCTGATCGCCGACC
TGTCCAAAGCCATCGGATAA

Protein sequence :
MKLGTKLIHAGVTPDPSTGAIMTPIFQTSTYVQNAPGDHKGYEYARTQNPTRDALQNALAAIENGKYGISFGSGLAATDA
VMKLLQPGDEVIASNDLYGGTYRIFTKIFERYGIKFHFIGMQDAENIRQYVNKNTKLLWIETPTNPLLNIIDIAASAKIA
KENKLLLCVDNTFASPYLQNPLDLGADIVVHSATKYLGGHSDVVHGAIVVKEEALAKQLYFIQNSCGAVPGPQDCFLVLR
GLKTLHVRMQRHCENGAVIAQFLRQHPKVAKVHWCGFEDHPNHHIAKQQMRGFGGMISFTLKDDSQEAAFKVLSGTHLFS
LAESLGGVESLIGHPASMTHASIPREERIANGLVDSLIRLSVGIEDAEDLIADLSKAIG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 5e-87 52
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-85 51
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 3e-62 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cpin_0494 YP_003120193.1 cystathionine gamma-synthase BAC0207 Protein 2e-63 41