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Name : Cpin_4763 (Cpin_4763) Accession : YP_003124399.1 Strain : Chitinophaga pinensis DSM 2588 Genome accession: NC_013132 Putative virulence/resistance : Virulence Product : nucleotide sugar dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0677 EC number : - Position : 5938132 - 5939460 bp Length : 1329 bp Strand : - Note : TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP- glucose/GDP-mannose dehydrogenase dimerisation; UDP- glucose/GDP-mannose dehydrogenase; KEGG: nis:NIS_0283 UDP-glucose/GDP-mannose dehydrogenase DNA sequence : ATGTCATCATCAGGGATAAATACTAACGAACAGAAGACGGTAGCCAACGCCAGTATAGCCATCATTGGCCTGGGGTATGT CGGTTTGCCCCTGGCGATCGAATTTGCGAAAAAGTACCGTACACTCGGTTTTGATATCAATGAAGTGAGAGTAAGAGAGC TGACCGTAGGTAAAGACAGGACAAGAGAAGCCAACATAGAGGAACTGAAAAGGGTGACCGCAGCCGCTGCCGGAACATCG GGTACAGGACTGACACTGTCTTCTGTAAAGAATGACTTGCAGACCTGCAATATATTCATCGTCACCGTACCGACGCCGAT AGATGATTTTAAAGCGCCGGATCTTGGACCGCTGTTAAAAGCTTCTGAAATGCTGGGCAGTGTGCTTAAAGCGGGTGATA TCGTGATTTATGAGTCCACTGTATACCCGGGTTGCACAGAAGAGGATTGTGTGCCGGTGCTGGAGAAAACCTCCGGACTG ACATTCAACAAAGACTTCTTCGCCGGTTATTCTCCCGAAAGGATTAATCCGGGCGACAAGGTCAATACCCTGACCCGCAT CAAAAAAGTGACCAGCGGGTCTACGCCGGAAATCGCAGAAAAAGTAGATGCATTGTATCGCTCCATCATTGAAGCCGGCA CGCACAAGGCGTCCTCCATCAAAGTGGCGGAGGCATCCAAAGCCATCGAAAATGCGCAGCGTGACGTCAATATCTCTTTT GTCAACGAACTGGCACTCATCTTCGACCGTATCGGGATCGACACCAACGATGTCATCGAAGCGGCAGGTACAAAATGGAA CTTCCTTAAATATAAACCCGGACTGGTAGGTGGTCACTGCATCGGCGTTGATCCTTACTACCTGGCGCATAAAGCACAGG CACTGGGCTATCATCCGCAGGTAATCCTGTCAGGCCGCAGGGTGAACGACAACGTCGGGAATTTTGTGGCCAATAAGGTG GTGAAGCTGATGATTGAGAAAGACCATAAAATCAAAGGCTCCCGGGCACTGATCATGGGAATCACCTTTAAGGAGAATTG TCCGGATGTACGCAATACCCGCGTAGTTGATATCTACGAAGAACTGAAACAGTTCGGCCTCGAAGTAGATATCTACGATC CCTGGGCAGATGTGGAGGAAGTTAGAAACGTATATGAAGTGGAAGTGCAGAACGAACTGGATCAGACGGTGAGCTATGAC GCCATCATCGTAGCCGTTGCACATGATGAGTTCCTGACACTGGACTATGGGAAGATCAAAAGCGATAATGCCGTCATTTT CGATACGCGCTCCTGCCTGGACAGAAACCTGGTAGACGCCAGGCTATAA Protein sequence : MSSSGINTNEQKTVANASIAIIGLGYVGLPLAIEFAKKYRTLGFDINEVRVRELTVGKDRTREANIEELKRVTAAAAGTS GTGLTLSSVKNDLQTCNIFIVTVPTPIDDFKAPDLGPLLKASEMLGSVLKAGDIVIYESTVYPGCTEEDCVPVLEKTSGL TFNKDFFAGYSPERINPGDKVNTLTRIKKVTSGSTPEIAEKVDALYRSIIEAGTHKASSIKVAEASKAIENAQRDVNISF VNELALIFDRIGIDTNDVIEAAGTKWNFLKYKPGLVGGHCIGVDPYYLAHKAQALGYHPQVILSGRRVNDNVGNFVANKV VKLMIEKDHKIKGSRALIMGITFKENCPDVRNTRVVDIYEELKQFGLEVDIYDPWADVEEVRNVYEVEVQNELDQTVSYD AIIVAVAHDEFLTLDYGKIKSDNAVIFDTRSCLDRNLVDARL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 8e-109 | 55 |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 8e-109 | 55 |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 4e-100 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Cpin_4763 | YP_003124399.1 | nucleotide sugar dehydrogenase | VFG0431 | Protein | 3e-109 | 55 |
