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Name : Cpin_4220 (Cpin_4220) Accession : YP_003123877.1 Strain : Chitinophaga pinensis DSM 2588 Genome accession: NC_013132 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0210 EC number : - Position : 5275205 - 5277091 bp Length : 1887 bp Strand : + Note : KEGG: afe:Lferr_0295 hypothetical protein DNA sequence : ATGGCTACCAGTAGAATCAATAAACCCGACACTTCAGCTGATCACGAATTAAGGAATTGTATTGATACCAAGCAAAGTTT TGTGATGATTGCAGGTGCAGGATCAGGAAAAACCACCTCGCTTATTAAAGGACTGGATTACATTAGAAGTAGATACGGCA ATCAACTTAGGGCAAAACGCCAGAAAATAGCTTGTGTTACTTATACTACCAATGCTGTTGATGAAATTATCGGAGATGTG CAGGGAGATTCTTTATTTCATGTATCAACAATCCATAGCTTCCTTTGGGAGATTATCAGCCCGTTTCAAAAAGACATTAA AGACTGGGTTAAACAGCGGGTACGAGAGAAAATAGCGAAAATTCAGCAAGCTATCCAAGAATATGGCCCTAGGGTACAGC AAAAAACTAAGGATAAAGACCAAGCAGAGTTCTTGCGACTGGAAGAGGTTAGCAGATTGATAGATTCCGTGAACAATTTT CGCTATGAGACTGGGGCAGATTACACAAAGGGCATAATTGGACATGCTGATATACTCAGAATGGTACCAGAATTAATACA AGGTAAGACCCTACTAAAGAAAATAGTTATACAAAAATTTCCGTTTTTACTCATTGATGAAAGCCAAGATACTGCCCCCA ACGTTGTCGAATGTTTTCTTAGCGTAGACGCCCAAAAGCAGTCGGATTTTTGTTTAGGATTTTTTGGAGATCCCATGCAA AAAATCTACTTAACAGGGATTGGAAAAATTCCTGACCGAGATAATTGGAAAACTATTGTTAAGCCGGAAAATTTTCGATG TGCTTCTGCCGTATTGGAACTGATCAATCTGATAAGAAAACCGGCAGATCAAATTGAACAAACAGGTGGTAAAATGGAAA ACGTTGGCGGTATGCTAACTCCGGTTGTAGGTTCAGCACGGTTATTCATATTACCTGCTAACGAAGAGAGGTCAACGAAT GTGGAAAAGGTAAGGAATTTTATTGCTCGCGAGGAACAAGATCCTGCCTGGCGCGATGATAGTGGCTCCGATCTGAAAAT TTTAGTATTGGAACACCGAATGGCAGCAAAAAGATTAGGCTTTGAACAACTGCATGCTGCTTTTAAGGATGGAACGCCAG AGTCCATCGGAAGCGGCTTCAGCGAAGGAAATAGCTGGGCTCTTTCCTTATTCCAGAAATATATACTCCCTTTAATCGAG GCTCAGTCAATTGGAAAACAGTCCAACGTGATGACTCTGCTTAGAGCATTTTCGCCGATTTTAGAAAAAGAGTATTTGCA GAAGCATAAAATTAGTGCAGAAGACCTGAAGGTTTTGGATCAAACTATAAAAGAACTAGTTGCCTTGTTTGCTGACCCGA ACATTTCTGTTGCCCAAATCTTAGATCTTATTGAAACGAGACGTTTAGCTGTTCTTGATGAAAGAATAGCCGCCAAGCTA CGTGATGAACCTTTATTGATTGAGAATGCAGAAGCTATATCACGTGTACTTGAGAAATACTTTCAATGCTCAGTCAACCA ATTATTAGGATATGATAAGTATATAAGAGAAGAGTCTGTGTACTCAACGCAGCATGACGTAAAGGGATCCGAATTTAAGC GTGTTATAGTTATATTGGATGACGAGGAAGGCAAAAGGTCCACTTTGTACTCCTATGAGAAACTACTCGGACTTAAACCT CTTTCGGATACCGATACCGAAAATATCTCAGAGGGAACCGAATCCGTTTTGGACCGTACCAGGAGATTGTTTTACGTTTG TTGTTCGAGAGCTCAAAAAGATTTGGCAGTAATATGGTTTGTCCAAGACGTTGATGAGGCGCTCGCGGTATTAAAAGATA GTATATTTTCAGATGATCAAATAATTATGGAGCATAAACTAGGTTGA Protein sequence : MATSRINKPDTSADHELRNCIDTKQSFVMIAGAGSGKTTSLIKGLDYIRSRYGNQLRAKRQKIACVTYTTNAVDEIIGDV QGDSLFHVSTIHSFLWEIISPFQKDIKDWVKQRVREKIAKIQQAIQEYGPRVQQKTKDKDQAEFLRLEEVSRLIDSVNNF RYETGADYTKGIIGHADILRMVPELIQGKTLLKKIVIQKFPFLLIDESQDTAPNVVECFLSVDAQKQSDFCLGFFGDPMQ KIYLTGIGKIPDRDNWKTIVKPENFRCASAVLELINLIRKPADQIEQTGGKMENVGGMLTPVVGSARLFILPANEERSTN VEKVRNFIAREEQDPAWRDDSGSDLKILVLEHRMAAKRLGFEQLHAAFKDGTPESIGSGFSEGNSWALSLFQKYILPLIE AQSIGKQSNVMTLLRAFSPILEKEYLQKHKISAEDLKVLDQTIKELVALFADPNISVAQILDLIETRRLAVLDERIAAKL RDEPLLIENAEAISRVLEKYFQCSVNQLLGYDKYIREESVYSTQHDVKGSEFKRVIVILDDEEGKRSTLYSYEKLLGLKP LSDTDTENISEGTESVLDRTRRLFYVCCSRAQKDLAVIWFVQDVDEALAVLKDSIFSDDQIIMEHKLG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| RL008 | AAP84135.1 | pathogenesis-related protein | Not tested | PAPI-1 | Protein | 6e-127 | 41 |
