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Name : Cpin_4219 (Cpin_4219) Accession : YP_003123876.1 Strain : Chitinophaga pinensis DSM 2588 Genome accession: NC_013132 Putative virulence/resistance : Unknown Product : ATP-dependent endonuclease, OLD family Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3593 EC number : - Position : 5272842 - 5275184 bp Length : 2343 bp Strand : + Note : KEGG: afe:Lferr_0294 ATP-dependent endonuclease, OLD family DNA sequence : ATGTATCTAAAAACGATATGCATAAAAAACTACCGTAGGCTTAAAGACGTTAAAATTAATATACAAAAGGACACAACAAT TTTTGTAGGAGCCAACAATAGTGGTAAGACCTCTGCCACTCATATATTTCAGTCATTTCTCAGTGGAAAGGCTGACTTTT CCTTACATGACTTCAGCGTCGATTGCTGGAAACTAATTAAGGATATTTCCCAGTCAACCAATATTGTCGAAGATATTTAC AAGCTGCCAACAATCTCCCTCGATTTATGGTTTGAAGTTAGTGAAGATGATTTGAACTATATTATTGACCTACTACCCAA TCTGGATTGGGCTTCGCAACCGGTAGGAATACGACTAATGTATGCGCCGAAAGGACATGATAACTTACTTTTAGAATACC AGACTGCCAAGGCAGATGCCCAGAAAAAGGGGAAAGATATGTTTCAGCCCTGGCCCAAGGATCTGTCCGACTACTTAACC AAAAGACTTAACCAGGAATATGAAATCAATTATTTTGTTTTAGACGCTACACAATTTGATCGGAACTATAACATCATTGA TCCCTCCTACACTCCCCATGCTCTACATGAAGATAAAGACAACAAGAAAACTGGTGCTGCTATAATCAGATCTTTGATCA AAGTAGACTTCTTAAACGCCCAACGTCATCTCTCAGATAACATATCCACAGGCAGATCGGAGGATCTGTCGAAAAGGTTT AACCGATTTTACGATCGCAACCTAGAAAAAAGAGAAAACGATCCTGAGATCTATAAGGCTTTGTTTGATTCCGAATCACT GCTAACCCAGCATCTGGAAAAGGTATTTCAGCCCACATTAGATAGCCTAAATAAATTAGGCTATCCAGGTTTTACTAATC CTAAACTTGTCATCAAAGCCGCCTATAGTCAGGAATCAGTAAGCCAGTACGCACAATTGCATTATTCTATTGGCGATTTA GACCTTCCGGATAAGTATAATGGACTTGGATTTAAAAACCTAATCTATATGGTGATTGAAATTCTAGATTTTCATGAGCG ATGGAAAGAAGATACAGATACTAAAGCACCATTACATTTGATTCTCATAGAAGAGCCAGAAGCACATCTACATGCACAAC TTCAACAGGTATTTATCCGGCAAATTCTAAATATCATTAATCCAAGCGGGCAGAATGACGGCTTCAATACCCAGCTGATC GTCAGTACCCACTCTCCGCATATTATTTATGAAAGTGGATTTTTACCGATAAGATACTTCAGGCGAACTTCCGAAGTTTC AAAATCTCCAGTGTCTGAGGTATTGAACCTGTCTACCTTTTACAATGAGAGTGAAAAAGACTCTCGGGAGTTTCTCGAGA AGTATATGAAATTGACTCATTGCGATTTATTTTTTGCAGATGCAGCCATCTTGGTTGAGGGAAATGTGGAAAGATTATTA TTGCCACTGATGATCGAAAAATGCCAAAAAAGCCTGCAATCCAATTATCTATCAGTAATTGAGGTGGGAGGGGCCTTTGC GTATCGATTCGAGCAATTGATTTCTTTTCTTGGCTTAACCACCCTTGTCATAACAGATCTGGATAGTGTGTTTCCCCCTA AACCACTCCCTCCTAACAATGAAACGACAGAAAGCGCAGATAAGAGCGAGAAAAGTGAAGAAGAGGATAATGAGGAGGAT ATTGAAGAAGATGATTACGATGATGAGGAGGATAGCGAAGAAGAGGAGCAGAAAGGTAAAACGAAAAAAAAGACTGGGGC ATGTTCGTACAGTACGCCCGATGCCATCACGTCAAATTATACTTTACGGCACTGGTTACCTAAAAAAACAAAAATAGCTG AGATCCTAACCTGTTCTGAACAGGAGCGTACCCGCATCCAATCGGCCACCAACCGCGCTTCTGTTCAAGTTTGTTTCCAA AACAAAGTGGAGATAAATTGGGAAGGTAAAACTGATACTAATTGCGGGCGCACATTAGAAGAAGCATTTGCTTTCGAAAA CCTAGAATGGACGCAAAAAATTGAAAATAAACACCTCAACCTAAGAGTCATTCTAAAGACAAAGCAACTAACCGTTAGTG AAATTTCAGCTCGAATAAGCCGACGAGTACAGTCATCCAATTTCGAAAAAACAAATTTTGCATTGGGTCTATTAATGGCA AATGCGGACGAATGGAACGTTCCAGTTTATATTAAAGATGGCTTATATTGGCTAGATAAAATGTTAAATCCACCCCACCC ATTCAATACCCTACCTGAATACGTCAATATTCATGAGGATACTATACTACAGCCAACATTCCCTGCTGAGGAAGGAGAAA AAGAACCCAATACTTTTGAATGA Protein sequence : MYLKTICIKNYRRLKDVKINIQKDTTIFVGANNSGKTSATHIFQSFLSGKADFSLHDFSVDCWKLIKDISQSTNIVEDIY KLPTISLDLWFEVSEDDLNYIIDLLPNLDWASQPVGIRLMYAPKGHDNLLLEYQTAKADAQKKGKDMFQPWPKDLSDYLT KRLNQEYEINYFVLDATQFDRNYNIIDPSYTPHALHEDKDNKKTGAAIIRSLIKVDFLNAQRHLSDNISTGRSEDLSKRF NRFYDRNLEKRENDPEIYKALFDSESLLTQHLEKVFQPTLDSLNKLGYPGFTNPKLVIKAAYSQESVSQYAQLHYSIGDL DLPDKYNGLGFKNLIYMVIEILDFHERWKEDTDTKAPLHLILIEEPEAHLHAQLQQVFIRQILNIINPSGQNDGFNTQLI VSTHSPHIIYESGFLPIRYFRRTSEVSKSPVSEVLNLSTFYNESEKDSREFLEKYMKLTHCDLFFADAAILVEGNVERLL LPLMIEKCQKSLQSNYLSVIEVGGAFAYRFEQLISFLGLTTLVITDLDSVFPPKPLPPNNETTESADKSEKSEEEDNEED IEEDDYDDEEDSEEEEQKGKTKKKTGACSYSTPDAITSNYTLRHWLPKKTKIAEILTCSEQERTRIQSATNRASVQVCFQ NKVEINWEGKTDTNCGRTLEEAFAFENLEWTQKIENKHLNLRVILKTKQLTVSEISARISRRVQSSNFEKTNFALGLLMA NADEWNVPVYIKDGLYWLDKMLNPPHPFNTLPEYVNIHEDTILQPTFPAEEGEKEPNTFE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| RL009 | AAP84136.1 | pathogenesis-related protein | Not tested | PAPI-1 | Protein | 5e-125 | 49 |
