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Name : Cpin_4217 (Cpin_4217) Accession : YP_003123874.1 Strain : Chitinophaga pinensis DSM 2588 Genome accession: NC_013132 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 5269691 - 5270515 bp Length : 825 bp Strand : + Note : PFAM: integrase catalytic region; KEGG: mgm:Mmc1_2644 integrase, catalytic region DNA sequence : ATGTGTAAAGTGTTTAAAGTAAGCCGCAGTGGCTATTATGCCTGGTTAATTAGAAAACCTTCAAAACAGGCGATTGAGAA TCACGCTCTAAGCGATAGAATTGAAGCAATATACCGTTCTGGCAAAGGCCGGTATGGAAGTCCTAAAGTAACCAGGGTAC TCAAATCAGATGGAATACATGTATCACAACGGAGAGTAGCCCGGATCATGAGGTCAAAAGGGCTCCGTAGTGTAATTGTA GGTAAGTTTAAAGTCTGTACTACGGATTCTAATCATGACAAAGAGGTATCTTCTAACATATTAAACAGAGAATTCACTGC AACGTCACCATCAGAAAAATGGGTCTCAGACATTACATATATCCGTACAAAATCCGGGTGGCTCTATCTCACTGTCATTA TGGATCTGTTTGACAGGAAGATACTGGGATGGGCGATGAGTAAAGGGATGACAGCAGCAGAAACAGTAGTAGCAGCGTGG AAAATGGCTATCAGGAACAGGTCTGTAAAAGAGCATATGATCATCCATTCAGACAGAGGCGTACAATATGCCAGTCATGA ATTTCGGATATTGCTCAAATCAGGTCAAATAAGGCAAAGCATGAGCCGTAAAGGAAATTGCTGGGATAATAGTGTATGTG AAAACTTTTTCAAAATTCTCAAGTCAGAAACAGGGATTAACATCATTTACGATTCCTTTGAGGTTGCCAGAAGAGAAATA TTTGAGTTCATAGAAATCTGGTATAATCGAAGGAGAATACACTCCCGACTGGGATATATGACACCTGAACAATTTGGAAA TTCTTTAATCAAACAAGCGGCTTAA Protein sequence : MCKVFKVSRSGYYAWLIRKPSKQAIENHALSDRIEAIYRSGKGRYGSPKVTRVLKSDGIHVSQRRVARIMRSKGLRSVIV GKFKVCTTDSNHDKEVSSNILNREFTATSPSEKWVSDITYIRTKSGWLYLTVIMDLFDRKILGWAMSKGMTAAETVVAAW KMAIRNRSVKEHMIIHSDRGVQYASHEFRILLKSGQIRQSMSRKGNCWDNSVCENFFKILKSETGINIIYDSFEVARREI FEFIEIWYNRRRIHSRLGYMTPEQFGNSLIKQAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| Z1134 | NP_286669.1 | hypothetical protein | Not tested | TAI | Protein | 1e-42 | 41 |
| Z1573 | NP_287077.1 | hypothetical protein | Not tested | TAI | Protein | 1e-42 | 41 |
| tnpA1133 | ACK44540.1 | TnpA | Not tested | SGI1 | Protein | 3e-40 | 41 |
| orfB | AGK07032.1 | IS1133 transposase; OrfB | Not tested | SGI1 | Protein | 3e-40 | 41 |
| orfB | AGK07090.1 | IS1133 transposase; OrfB | Not tested | SGI1 | Protein | 3e-40 | 41 |
