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Name : Cpin_4001 (Cpin_4001) Accession : YP_003123664.1 Strain : Chitinophaga pinensis DSM 2588 Genome accession: NC_013132 Putative virulence/resistance : Virulence Product : ATP-dependent chaperone ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 4978818 - 4981433 bp Length : 2616 bp Strand : + Note : KEGG: dol:Dole_2696 ATPase; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Torsin; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: AAA ATPase DNA sequence : ATGAATCTGAACAACTTCACTATTAAATCGCAGGAAATACTGCAACAAGCGCAGCAACTGGCCTTCAATGGACAACAACA GGCCATTGAGACAGGGCACTTGCTGAAGGCCCTGCTGGAAGACCAGGACAGTGCTATCGACTATTTACTTAAAAAGAACA ATATAAATGTCAACTTCCTGTCTTCCAGACTGGAAGATCAAATAAAGAAATACCCCCGTATTTCCGGCGGGGAAGCCGGG CAGGTATTAGGCCGCGATGCGAATAACGCCATGCTCAGAGCTGGCTCCAGCATCAAGGAGTTTAAAGACGAATTTGTGAG TGTCGAACACCTGTTACTAGGTATACTGGGTGGCAGTGACGACACTGCCAAATTGCTGAAAGATGCAGGTTTGACAGAAA AAGGTCTGAAGGCTGCTATCAAAGATCTGCGTAAGGGTAGTACCGTCAATTCTCAAACTGCTGATACCCAATATAATTCC CTTCAGAAGTATGCAAAGAACCTGAATGAACTGGCACGTGCCGGTAAACTGGATCCTGTCATCGGTCGTGATGAAGAGAT CCGCAGGACCCTGCATATCCTTTCCCGCCGTTCCAAAAATAACCCTATCCTGGTCGGAGAACCTGGTGTAGGTAAGACAG CGATCGTGGAAGGGTTGGCGCATCGTATCATCAACGGAGACGTGCCTGAGAACCTGCGTTCCAAGATCATTTATGCCCTT GATATGGGTGCATTGATGGCTGGCGCTAAATACAGAGGGGAATTCGAAGAAAGACTGAAATCAGTGATTAAAGAGGTGAC GGAAAGCAACGGGGAACTGGTGCTCTTTATAGACGAGATTCATACCCTTGTAGGCGCTGGCGCTATGGAAGGCGCGATGG ACGCTGCCAACATTCTGAAACCGGCCCTGGCCCGTGGTGAATTACGTGCCATCGGCGCCACCACACTGACAGAATACCAG AAATATTTTGAGAAAGATAAAGCCCTGGAACGCCGTTTCCAGAAAGTGATGGTAGACGAGCCAAACGTGGAAGATGCCAT ATCTATCCTCCGTGGTCTGAAAGAGCGTTACGAAAGCCATCACCATGTGCTGATCAAAGACGAAGCGATCATTGCGGCGG TTGAATTATCGCACCGCTATATTACGGATCGTTTCCTGCCGGATAAAGCGATTGACCTGATTGATGAAAGTGCAGCCAAA CTCCGCCTGGAGATGAACTCCATGCCGGAGGAACTGGACGAACTGGAACGTCGTATCAGACAACTGGAAATTGAAAGAGA AGCGATCAAACGTGAGAATGATGAAGACAAGCTGCGTGAGCTGAACGGGGAGATTGCCCGTCTGGGAGAACAGCGCAGCA CTTTCAAAGCAAAATGGCAGGAGGAAAAAGAGATCGTAGATAAACTGCAGGCTGCTAAAGGCGATATTGAAAATCTGAAG CTGGAAGCAGAACAGGCAGAACGTAACGGGGAATACGGCCGTGTAGCCGAGATCCGTTATGGTAAGGTAAAAGAACAGGA AGAACTGATTGCAAAATATACAGCGGAGCTGAATGAAATGTCGACAGACCATAAGCGTTTGTTGAAAGAAGAGGTAGACG CAGAAGATATTGCGGAAAACGTTGCCAAAGCGACAGGTATTCCGGTATCGAGGATGTTGCAGAGTGAAAGAGACAAACTG CTCAACCTGGAAGAAGAATTGCACAAACGTGTGGTTGGTCAGGAAGAAGCGATCGTCGCTGTATCTGATGCGATCCGCAG AAGCAGGGCAGGATTACAGGATCCTAAACGTCCGATAGGTTCGTTTATCTTCCTGGGTACCACCGGCGTCGGTAAAACCG AACTGGCAAAAGCCCTGGCAGAGTACCTGTTTGACGACGACTCCATGATGACGCGCATCGACATGAGCGAATACCAGGAG AAACACGCCGTGAGCCGTCTGGTAGGTGCCCCTCCGGGATATGTGGGATATGATGAAGGCGGACAGCTGACAGAAGCCGT AAGACGTAAACCTTATTCTGTCGTGCTGCTGGATGAAATAGAAAAGGCGCATCCGGATACTTTTAACATTTTGTTACAGG TATTAGATGATGGTCGTCTGACAGATAATAAGGGTCGTGTGGTGAACTTTAAAAACACCATTATCATCATGACCAGCAAC ATGGGTAGCCAGATTATCCAGGAGAATTTCGAAAGGATTGACGAGAGCAACCGTGAGGACGTAGTAGATGCTACCAAAGC AGAGGTAATGAACTTACTGAAACAGACTATCCGTCCGGAGTTCCTGAACCGTGTGGACGAGGTGATTATGTTCCAGCCAT TGCTTCGCGAAGAAATTAAGGGAATAATTAACATTCAGTTACAACAGTTAAAGGACCTGGTAGCGCAAAATGGCATGATA TTGGAATTCTCTGACTATGCGCTCGACTACCTGGCCGTTCAGGGTTATGACCCTCAATTCGGCGCAAGACCACTGAAAAG GTTGATACAGAAAGAGATCATCAATCTGCTGAGTAAAAAGATACTTGCAGGGGATATCGATAAGACTAAGCCGGTGCTGA TTGACGTGTTTGACGGAGTAGTAGTCATCAGGAACAATCACACAATAGGCGCATAA Protein sequence : MNLNNFTIKSQEILQQAQQLAFNGQQQAIETGHLLKALLEDQDSAIDYLLKKNNINVNFLSSRLEDQIKKYPRISGGEAG QVLGRDANNAMLRAGSSIKEFKDEFVSVEHLLLGILGGSDDTAKLLKDAGLTEKGLKAAIKDLRKGSTVNSQTADTQYNS LQKYAKNLNELARAGKLDPVIGRDEEIRRTLHILSRRSKNNPILVGEPGVGKTAIVEGLAHRIINGDVPENLRSKIIYAL DMGALMAGAKYRGEFEERLKSVIKEVTESNGELVLFIDEIHTLVGAGAMEGAMDAANILKPALARGELRAIGATTLTEYQ KYFEKDKALERRFQKVMVDEPNVEDAISILRGLKERYESHHHVLIKDEAIIAAVELSHRYITDRFLPDKAIDLIDESAAK LRLEMNSMPEELDELERRIRQLEIEREAIKRENDEDKLRELNGEIARLGEQRSTFKAKWQEEKEIVDKLQAAKGDIENLK LEAEQAERNGEYGRVAEIRYGKVKEQEELIAKYTAELNEMSTDHKRLLKEEVDAEDIAENVAKATGIPVSRMLQSERDKL LNLEEELHKRVVGQEEAIVAVSDAIRRSRAGLQDPKRPIGSFIFLGTTGVGKTELAKALAEYLFDDDSMMTRIDMSEYQE KHAVSRLVGAPPGYVGYDEGGQLTEAVRRKPYSVVLLDEIEKAHPDTFNILLQVLDDGRLTDNKGRVVNFKNTIIIMTSN MGSQIIQENFERIDESNREDVVDATKAEVMNLLKQTIRPEFLNRVDEVIMFQPLLREEIKGIINIQLQQLKDLVAQNGMI LEFSDYALDYLAVQGYDPQFGARPLKRLIQKEIINLLSKKILAGDIDKTKPVLIDVFDGVVVIRNNHTIGA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 1e-101 | 42 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 4e-101 | 42 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 6e-101 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Cpin_4001 | YP_003123664.1 | ATP-dependent chaperone ClpB | VFG2084 | Protein | 8e-107 | 43 |
