Gene Information

Name : Cpin_0038 (Cpin_0038)
Accession : YP_003119746.1
Strain : Chitinophaga pinensis DSM 2588
Genome accession: NC_013132
Putative virulence/resistance : Unknown
Product : IstB domain-containing protein ATP-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 44607 - 45347 bp
Length : 741 bp
Strand : +
Note : PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: shn:Shewana3_1251 IstB ATP binding domain- containing protein

DNA sequence :
ATGAACACGACACAAACACTTCAACAAATGCAATCACTTCGCCTACAGGGCATGTTCCAGGCGTATCAAACTCAATTAGA
CCTACCCATGAATCAACAACTTGAAGGTCATGACCTGATTGCCCATCTGGTACAATCAGAAGAGCAAAATCGTATTAATG
AGAAGACCGCATATTATCTGAAGCTGGCCAAGCTGCGTCTGCCTGCAACCATTGAACAAATAGATTGTAGTCCCAGACGC
AATTTAAGCAAACAGCAGCTCGCACTACTAAGCGAAGGCCGCTATTTACAGCACGGAGAGAATGTACTGATTACAGGCGC
AACTGGTTGCGGAAAAAGCCATCTGGCCTGTGCCTTAGGGCATCAGGCATGCCTTCAGGGTTATAAAACAACTTACTTGA
ACATGAACCGCCTTATTGAGAAGGTTACCTTATCTAAACTTGACGGTTCCTACATTAAACTGCTTAATCACCTGGAACGA
CAAACCTTAATCGTGCTGGACGACTTTGGCTTAACGCCAATGACACAGGAAATCCGGCTTACTTTGCTGCAACTGCTTGA
AGATCGTTATGGTAAGAAAAGTATCATCGTCACATCACAACTACCAGTCTCTAAATGGCATGAGTACATTAATGATCCAA
CGTTAGCTGATGCTATCCTTGACAGAATGACAGCAAATGCACATCGTATTGAACTAAAGGGAGACTCTATGAGGAGAAAA
AAGGCATCTGAGAATCAGTAA

Protein sequence :
MNTTQTLQQMQSLRLQGMFQAYQTQLDLPMNQQLEGHDLIAHLVQSEEQNRINEKTAYYLKLAKLRLPATIEQIDCSPRR
NLSKQQLALLSEGRYLQHGENVLITGATGCGKSHLACALGHQACLQGYKTTYLNMNRLIEKVTLSKLDGSYIKLLNHLER
QTLIVLDDFGLTPMTQEIRLTLLQLLEDRYGKKSIIVTSQLPVSKWHEYINDPTLADAILDRMTANAHRIELKGDSMRRK
KASENQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_3529 YP_854246.1 ISEc12 ATP-binding protein Not tested PAI I APEC-O1 Protein 2e-34 42
unnamed CAC39295.1 hypothetical protein Not tested LPA Protein 2e-34 42
ORF_5 AAZ04416.1 putative transposase subunit Not tested PAI I APEC-O1 Protein 2e-34 42