Gene Information

Name : Cpin_3387 (Cpin_3387)
Accession : YP_003123055.1
Strain : Chitinophaga pinensis DSM 2588
Genome accession: NC_013132
Putative virulence/resistance : Unknown
Product : FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2072
EC number : -
Position : 4150892 - 4151938 bp
Length : 1047 bp
Strand : -
Note : PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bvi:Bcep1808_5560 FAD-dependent pyridine nucleotide-disulphide oxidoreductase

DNA sequence :
ATGGAAAAGGTATACGATGTTATAGTGATTGGCGGAGGACAAAGTGCATTGGCGGTCGCGTATTATCTGCGACGCACCAC
ACTCGATTATATAATACTTGACAAAGAAGCGATGCCAGGAGGCGCATGGCAGCATACCTGGGACTCGCTGACGCTCTTCT
CTCCTGCTTTATGGAGCTCTCTTCCCGGCGTTATCATGCCAGGTGGCAACAATTATTATCCTACAAGAGACGAAACGATC
GATTACCTGCGCAATTATGAGATGCGGTACAATTTCCCTGTACAAAGATCAGTGACCGTTTCGGCTGTCCGCAGAGAAGA
AAACATATTTATCCTGTCTACCGATAAAGGGGATTATAAGGCCCGGGCTGTCATCAGCGCTACCGGTTCTTATGTAAATC
CTTATATACCTGCCATCCCCGACAGGGAACTGTACAAAGGCACTGTGCTACATTCTGCACAATATAAAAACCCGGCAGCC
TTTGCCGGTAAAAAAGTCGCTGTCGTAGGAGAAGGTAATTCAGGCGCCCAGATCCTCGCGGAAGTATCCAAAGTAGCCAG
TACCCTGTGGATCGTACAGGAAGCGCCTTCTTTTCTCTCCGGCGAAATAGACGGCCGGTATCTTTTTGATGTCGCCACGA
TGGTCTATAAGGCAAAGCAGGAAGGACGGACCTACCAGGCCCCTACATTGGGACATATCGTACAGGTCCCTGCAGTAAAA
GAGGCGATTGAAAGGGATATTTATCACTCTTTACCCGCTTTTGACCGCTTTACGGAAAATGGTATCGGCTGGAACGGCGG
ACAGGAAGCAGCTGTGGATGCAGTCATCTTCTGTACCGGCTTCTCTCCTGCTTTACAGCACCTGGCCCCATTAAATGCGA
CCCGTGCAGACGGTAAGATCCATACCAATGAGACGATTGCCATAGACATTCCCGGCCTTTGGCTGGTGGGCTATGGACAA
TGGACAGGCTTTGCTTCGGCTACCCTGATTGGTGTAGGCAGAACTGCCAGGAAAACAGTGGAGGAAATCCAGCTTTATCT
GCAATAA

Protein sequence :
MEKVYDVIVIGGGQSALAVAYYLRRTTLDYIILDKEAMPGGAWQHTWDSLTLFSPALWSSLPGVIMPGGNNYYPTRDETI
DYLRNYEMRYNFPVQRSVTVSAVRREENIFILSTDKGDYKARAVISATGSYVNPYIPAIPDRELYKGTVLHSAQYKNPAA
FAGKKVAVVGEGNSGAQILAEVSKVASTLWIVQEAPSFLSGEIDGRYLFDVATMVYKAKQEGRTYQAPTLGHIVQVPAVK
EAIERDIYHSLPAFDRFTENGIGWNGGQEAAVDAVIFCTGFSPALQHLAPLNATRADGKIHTNETIAIDIPGLWLVGYGQ
WTGFASATLIGVGRTARKTVEEIQLYLQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trkA CAJ77013.1 putative monooxygenase Not tested AbaR1 Protein 2e-78 51
trkA AFC76430.1 TrkA Not tested AbaR5 Protein 2e-78 51
trkA ADZ05764.1 FAD-dependent pyridine nucleotide-disulphide oxidoreductase Not tested AbaR11 Protein 6e-75 50