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Name : Cpin_2575 (Cpin_2575) Accession : YP_003122259.1 Strain : Chitinophaga pinensis DSM 2588 Genome accession: NC_013132 Putative virulence/resistance : Unknown Product : alpha amylase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : - Position : 3150198 - 3152012 bp Length : 1815 bp Strand : + Note : PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: aba:Acid345_2519 alpha amylase DNA sequence : ATGTCAAGTAAAGTAAAGGACACAAACTGGTGGAAAGAGTCGATCATCTATCAGATATATCCATGGAGTTTTAAAGACAG TAATGGTGACGGCATCGGAGATCTGCAGGGTATCATATCCAAACTCGACTATATTCAGCGTCTGGGTATCGATATGGTAT GGTTAAATCCCGTTTACAAATCTCCGAATGATGATAATGGATATGATATCAGTGACTATTATGATATCATGAAAGAGGTG GGTACAATGGCAGATTTTGACGCTTTGCTTAAAGGGCTGCACGACAGAAACATCCGTCTGATGATGGATATCGTTGTCAA CCATACCAGTGACGAACATCCCTGGTTTCAGGAAGCAAAACAGTCCCGGCAAAGCCCTTACTATAACTATTACCATTGGT GGCCGGCCGAAAAAGGCAAACCGCCCCGCCGCTATAGTCACTTCGACGCTACAGGCAGCGCATGGACATATAATAAAGCA ACGGATTCTTACTATCTGCATTACTTCTCCGAAAAAATGCCCGACCTCAATTGGGAAAATCCGCAAACGCGTAAAGACAT TTATGCCATTATGAACTTCTGGTTTGATAAAGGCGTGGACGGCTTTAGAATGGATGCCATCTGTTATATCTCCAAAGATA CCAGCTGGCCGGATGTGGAAAAATTAGTAGCAGAAAAATACCAGCATGACTGGGCTGGTTATTACGCGCACGGTCCGCAC TTACATGAATACTTACAGGAATTACACCGTGAAACGCTTAACCGGCCAGATGTCACTACATTGGCGGAAGCTTCCGGTAT TACAAGAGAAGAAGCGCTGGATTTCGTGAAGGAAGACCGGAAAGAACTGCACATGCTATATCATTTCGAAGGCGTACAAC TGGGATTCACAAAAGAAGGATATAAACGTCTCGATCCCAAGGGTATTGATCTCCGCCAGCTGAAACAGTTATACACTGAC TGGGACAGGATATTTGAACTGGATGGCTGGGGCACTATTTACCTTGGTAATCACGATCAGCCGCGTATGGTAACCCGTTG GGGGAATGACGATGAGCAATTCCGCGAAATCTCTTCCAAGATGCTGATCACCTTTTTGCTTACCATGAGAGCGACGCCGA TTTTCTATTATGGCGATGAACTCGGTATGACAAATATCCGTTTTGAGAAGATAGAAGACTACCGCGACATCGAGACCATC AACATGTATAAATACATTCAAAGCCAGGGCGGTGATTTACCGCATTTTCTGAAAGATGCAGCTCTCACTGGCAGAGATAA TGGTCGTACGCCCTTTCAATGGGATGAATCGCCTAATGCGGGTTTTACAACCGGTAAACCCTGGCTGAAAATCAATGAAA ATTACAAGTTGATCAACGCCGCGCAACAGGATAGGGATGAACGCTCTGTTTTACAATACTTCAAGCAACTGGTACTGTTG CGTAAACATAAACCAGTACTGATCCATGGCAAATATGAATTGCTGGATGCCGATCATCCACAGGTGTACACCTACACCCG TACACTGGACCAGGAGAAAATGCTGATCGTTCTCAACTTTTCAAAAGAAGAGGTGTTGTATACATTGCCGTTTGTACTCG ACATCGGTACTGAACCACTCGTGAATAATATGCTCTCCTTCAAACTGGAGAATGATACCGTAACACTTGCTCCTTATCAG GCATTGGTCTTCGGACCACTGCCAACAGACTTGCCGCCCTTGCAGGACGAGGAACAGGCTTTTGCTGAAGACCTGCCGCT TGAGAAAATAAAAGAAGAAAACTCAAGCCTCGAATCCAATGAGCTTGCTATTTGA Protein sequence : MSSKVKDTNWWKESIIYQIYPWSFKDSNGDGIGDLQGIISKLDYIQRLGIDMVWLNPVYKSPNDDNGYDISDYYDIMKEV GTMADFDALLKGLHDRNIRLMMDIVVNHTSDEHPWFQEAKQSRQSPYYNYYHWWPAEKGKPPRRYSHFDATGSAWTYNKA TDSYYLHYFSEKMPDLNWENPQTRKDIYAIMNFWFDKGVDGFRMDAICYISKDTSWPDVEKLVAEKYQHDWAGYYAHGPH LHEYLQELHRETLNRPDVTTLAEASGITREEALDFVKEDRKELHMLYHFEGVQLGFTKEGYKRLDPKGIDLRQLKQLYTD WDRIFELDGWGTIYLGNHDQPRMVTRWGNDDEQFREISSKMLITFLLTMRATPIFYYGDELGMTNIRFEKIEDYRDIETI NMYKYIQSQGGDLPHFLKDAALTGRDNGRTPFQWDESPNAGFTTGKPWLKINENYKLINAAQQDRDERSVLQYFKQLVLL RKHKPVLIHGKYELLDADHPQVYTYTRTLDQEKMLIVLNFSKEEVLYTLPFVLDIGTEPLVNNMLSFKLENDTVTLAPYQ ALVFGPLPTDLPPLQDEEQAFAEDLPLEKIKEENSSLESNELAI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 5e-116 | 44 |
