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Name : Cpin_2557 (Cpin_2557) Accession : YP_003122241.1 Strain : Chitinophaga pinensis DSM 2588 Genome accession: NC_013132 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 3126551 - 3127375 bp Length : 825 bp Strand : + Note : PFAM: integrase catalytic region; KEGG: net:Neut_2192 integrase catalytic subunit DNA sequence : ATGTGTAGGGTATTCAGAGTGAGCCATAGTGGGTATTATGCCTGGCTAACCAGGAGGCCATCGCAACTTGCCATAAACAA TGAACTAATATCTAAAAAGATCGAAGAGATATACCACAGCAGCAAAGGACGATACGGCAGTCCGAAGATAACAAAGAAGT TAGCCTCTATGGGTATGGACGCATCCAGGCCAAGAGTAGCCAGAATAATGAAAGGGAAGGGCCTTCGCAGCGTTATTACG GGTAAATTTAAAGTCTGTACAACTGAATCCAATCATAGCCTTGAGGTATCTGATAATGTCCTTAAACGGGAATTTAATGC AAAGGAGCCTTCAGAGAAGTGGGTGTCTGATATCACTTATATCCGGACCCAGGAAGGCTGGCTTTATCTTACCGCTATTA TGGATCTGTTTGATAGAAGAATCGTTGGCTGGTCAATGAGTACCGGTATGACAGCAAGAGAAACGGTTGTTGCGGCCTGG AAGATGGCAGTCCGGAATAGATCGGTGGTTCGAAACATTCTCTTTCACTCCGATAGAGGTGTACAGTATGCTAGTCAGGA GTTCCGAGAATTGCTTAAAGACAAGCCAGTACAACAAAGTATGAGCAGGAAAGGAAATTGTTGGGATAACGCTGTAATGG AGAATTTCTTTAAGATCCTCAAATCAGAGACGGGGTATAACACAGTATATTCTTCTGTCGAGATCGCAAAAAAAGAGTTA TTTGAGTTCATCGAAATATGGTACAACAGGCAGCGTATACATTCAATTCTAGGATTTTTAACCCCTGAAGAATTTGGGAA ATCTATTCTAAAACAAGCAGCTTAA Protein sequence : MCRVFRVSHSGYYAWLTRRPSQLAINNELISKKIEEIYHSSKGRYGSPKITKKLASMGMDASRPRVARIMKGKGLRSVIT GKFKVCTTESNHSLEVSDNVLKREFNAKEPSEKWVSDITYIRTQEGWLYLTAIMDLFDRRIVGWSMSTGMTARETVVAAW KMAVRNRSVVRNILFHSDRGVQYASQEFRELLKDKPVQQSMSRKGNCWDNAVMENFFKILKSETGYNTVYSSVEIAKKEL FEFIEIWYNRQRIHSILGFLTPEEFGKSILKQAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hp1 | AAC61713.1 | Hp1 | Not tested | PAI I CFT073 | Protein | 7e-43 | 41 |
| c3575 | NP_755450.1 | transposase insF | Not tested | PAI I CFT073 | Protein | 9e-43 | 41 |
| Z1134 | NP_286669.1 | hypothetical protein | Not tested | TAI | Protein | 8e-43 | 41 |
| Z1573 | NP_287077.1 | hypothetical protein | Not tested | TAI | Protein | 8e-43 | 41 |
| ECO111_3732 | YP_003236068.1 | putative IS3 transposase InsF | Not tested | LEE | Protein | 4e-43 | 41 |
| unnamed | AAL57581.1 | transposase 1 | Not tested | LEE | Protein | 1e-43 | 41 |
| unnamed | AAL57519.1 | transposase 1 | Not tested | LEE | Protein | 1e-43 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Cpin_2557 | YP_003122241.1 | integrase catalytic subunit | VFG1706 | Protein | 4e-43 | 41 |
