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Name : Cpin_0216 (Cpin_0216) Accession : YP_003119917.1 Strain : Chitinophaga pinensis DSM 2588 Genome accession: NC_013132 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 262001 - 263275 bp Length : 1275 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGTTACAAGTTCCGTTCATTCGTCAAAACAAGGACCAGGTACTGGAAAGGCTGACCCTGAAGAACTTCAGGGAGCTGGA ACTGGTGGACCAGGTACTTGAGCTGGACGACAAGCGCAAGAAATTAACCCTTGAGTATGATGAAACACAGGCCAAAGTAA ACTCGAATTCCAAGGAAATCGGTAAACTGATGGCACAGGGGCAGAAAGATGAAGCGGAATCTCGTAAATCGGAAGTAGCA TCACTGAAAGCAAGACTGCAGCCTATTAACGAAGAACTCGCGGCTACAGAAAAGCTTTTGCACGATACATTGGTAAAACT GCCAAACCTGCCTTCTCCGCTGGTGCCTCCCGGTAAAACACCGGAAGAGAACGTGGAAGTCCGCAAGGGTGGCGATATCC CTCAGTTACATGAGGGCGCTGTGCCTCACTGGGACCTGGTGAAGAAATATGACCTGATCGACTTCGAACTGGGTAACAAG ATCACAGGCGCTGGTTTCCCGGTTTATAAAAACCGTGGAGCACGTTTACAACGCGCTATGATCCAGTATTTCCTGAACTT CAATACCGATAAAGGTTACACTGAATTCCAGGTGCCTCACCTGGTGAACAGTGATTCCGGATATGGTACAGGTCAGCTGC CTGATAAAGAAGGACAGATGTACTTCGTAGGAGAAGATGAATTATACCTCATCCCTACAGCCGAAGTACCTCTGACGAAT ATCTTCAGAGATGAAATACTGAAAGACACCGAGCTGCCGGTAAAACTGACTGGCTATACGCCTTGTTTTCGTCGTGAAGC AGGTTCTTATGGTAAAGACGTACGTGGTCTGAACCGTTTGCACCAGTTTGACAAGGTAGAGGTTGTACAGGTGGTACATC CGGAGAAATCTTATGAGATCCTGGATGAAATGGTAGCGCATGTGGAAGAACTGGTGAAGTCACTGGAACTGCCATACCGC ATACTGCGTCTTTGCGGTGGTGATATGGGATTTGCTTCTGCGCTGACCTACGATTTCGAAGTATACAGCACTGCACAGCA GAAATGGCTGGAAGTGAGCTCTGTATCCAATTTTGAGTCTTTCCAGGCAAACCGCGCGAAGATCCGTTTCAAAGACGGTG GTGGTAAACCACAGCTGGTACATACGCTGAATGGCAGCTCCCTGGCATTACCGCGTATCCTGGCTTGTATCCTGGAAAAC AACCAGACACCGGAAGGTATCAATATTCCGAAGGTATTACAACCTTATTTCGGCGCCGATAAGATCGCACTGTAA Protein sequence : MLQVPFIRQNKDQVLERLTLKNFRELELVDQVLELDDKRKKLTLEYDETQAKVNSNSKEIGKLMAQGQKDEAESRKSEVA SLKARLQPINEELAATEKLLHDTLVKLPNLPSPLVPPGKTPEENVEVRKGGDIPQLHEGAVPHWDLVKKYDLIDFELGNK ITGAGFPVYKNRGARLQRAMIQYFLNFNTDKGYTEFQVPHLVNSDSGYGTGQLPDKEGQMYFVGEDELYLIPTAEVPLTN IFRDEILKDTELPVKLTGYTPCFRREAGSYGKDVRGLNRLHQFDKVEVVQVVHPEKSYEILDEMVAHVEELVKSLELPYR ILRLCGGDMGFASALTYDFEVYSTAQQKWLEVSSVSNFESFQANRAKIRFKDGGGKPQLVHTLNGSSLALPRILACILEN NQTPEGINIPKVLQPYFGADKIAL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 7e-72 | 43 |
