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Name : Cpin_1929 (Cpin_1929) Accession : YP_003121626.1 Strain : Chitinophaga pinensis DSM 2588 Genome accession: NC_013132 Putative virulence/resistance : Unknown Product : xylose isomerase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2115 EC number : - Position : 2356607 - 2357935 bp Length : 1329 bp Strand : + Note : catalyzes the interconversion of D-xylose to D-xylulose DNA sequence : ATGAGTATTACTTTAGGGAATCAGGAGTACTTCAAAGGCATTGGTAAAATCGCCTATGAAGGACCTCAGTCAACAAATCC GTTTGCCTACAAATGGTATGACGAGAACAGAAAGATCGGTGGTAAAACCATGAAGGAACTGTTTCGTTTTGCAGTCTCCT ACTGGCACACCTTCTGTGGTACCGGCGGAGATCCGTTCGGTCCGGGCACCAAGGCTTTCCCCTGGTTAACTGCCACTGAT GCAGTGCAGAGTGCGAAAGATAAAATGGATGCTGCATTCGAATTCTTCACCAAACTGGGTGTTCCTTACTACTGCTTCCA CGATGTGGATCTGGTAGATGAAGGCGCATCGATCAGCGAGTACGAAAGCCGTATGCAGCAGATCGTGGAGTATGCAAAAG AAAAACAAAAAGCCAGCGGTGTAAAACTGCTGTGGGGTACTGCGAATGTGTTCAGCAATCCGCGTTACATGAATGGTGCT GCTACCAATCCGGACTTCGCTGCTGTTGCCTATGCAGGTACCCAGGTGAAAAACTCCCTGGATGCAACGATCGCACTGGG TGGTGAAAACTACGTATTCTGGGGCGGCCGTGAAGGTTACATGACCCTCCTGAACACCGACATGAAGCGTGAACAGGAAC ACCTGGCCCGCTTCCTGACAATGGCAAAAGATTACGCGCGTAAACAGGGCTTTACAGGTACCTTCTTCATCGAACCTAAG CCTTGCGAACCTACCAAACATCAGTACGATTATGATGCTGCGACCGTAATCGGCTTCCTGCGTCATTTCGGACTGGATAA AGACTTCAAATTGAACCTGGAGGTAAACCACGCAACCCTGGCAGGTCATACCTTCCAGCACGAACTGCAGGTTGCTGCCG ATGCAGGTATGCTGGGCAGTATCGACGCAAACCGTGGTGATGCACAGAACGGCTGGGATACTGACCAGTTCCCGATGAAC CTGAACGACATGGTTGAGTTCATGCTGGTGATCCTGGAAGCTGGCGGCTTCTCCGGCGGTGGTGTGAACTTCGATGCGAA AACACGCCGTAACTCAACTGACCTGGAAGACATCTTCCATGCACATATCGGTGGTATTGATTCCTTTGCACGTGCCGCCG TTATCGCAGAAAAAGTGCTGGAACAGTCTCCATACAAACAGTTCCGCAAAGACCGTTACGCTTCATTCGACAGCGGTAAG GGTAAAGATTTCGAAGCTGGTACCCTGACACTGGAAGATCTGCGCAGCTTTGCCGTAAGCAATGGCGAGCCTAAGCATAT CAGCGGTAAACAGGAATGGCTGGAGAATATCATCAATCAGTATATCTGA Protein sequence : MSITLGNQEYFKGIGKIAYEGPQSTNPFAYKWYDENRKIGGKTMKELFRFAVSYWHTFCGTGGDPFGPGTKAFPWLTATD AVQSAKDKMDAAFEFFTKLGVPYYCFHDVDLVDEGASISEYESRMQQIVEYAKEKQKASGVKLLWGTANVFSNPRYMNGA ATNPDFAAVAYAGTQVKNSLDATIALGGENYVFWGGREGYMTLLNTDMKREQEHLARFLTMAKDYARKQGFTGTFFIEPK PCEPTKHQYDYDAATVIGFLRHFGLDKDFKLNLEVNHATLAGHTFQHELQVAADAGMLGSIDANRGDAQNGWDTDQFPMN LNDMVEFMLVILEAGGFSGGGVNFDAKTRRNSTDLEDIFHAHIGGIDSFARAAVIAEKVLEQSPYKQFRKDRYASFDSGK GKDFEAGTLTLEDLRSFAVSNGEPKHISGKQEWLENIINQYI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| xylA | NP_814326.1 | xylose isomerase | Not tested | Not named | Protein | 1e-103 | 52 |
| ef0082 | AAM75286.1 | EF0082 | Not tested | Not named | Protein | 9e-104 | 52 |
