|
Name : Cpin_1529 (Cpin_1529) Accession : YP_003121227.1 Strain : Chitinophaga pinensis DSM 2588 Genome accession: NC_013132 Putative virulence/resistance : Unknown Product : S-adenosylmethionine/tRNA-ribosyltransferase- isomerase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0809 EC number : - Position : 1874652 - 1875701 bp Length : 1050 bp Strand : + Note : TIGRFAM:S-adenosylmethionine/tRNA- ribosyltransferase -isomerase; PFAM: Queuosine biosynthesis protein; KEGG: bcb:BCB4264_A4537 S-adenosylmethionine:tRNA ribosyltransferase-isomerase DNA sequence : ATGAAACTATCACAGTTTAGATTCGATCTTCCTTTAAATCTGATTGCGCAGCACCCTTCCAAGACTAGAGATGAAGCACG TTTGATGGTGGTAAACCGTGCCACCGGTAAAATCGAGCACAAGGTGTTCCGTGATATCATCAACTACTTCAATGATAAGG ATGTAATGGTGGTGAACAACACCAAGGTATTCCCTGCTCGTCTGTATGGCCGTAAGGAGAAGACTGGTGCAAAGATTGAA GTATTCCTGCTCCGTGAGCTGAACAAGCAGAACCGCTTGTGGGATGTAATCGTAGATCCTGCCCGTAAGATCAGGGTGGG TAACAAATTATACTTTGGCGATGATGAATCGCTGGTAGCAGAAGTGATTGATAACACCACATCCCGTGGCCGTACGATCC GCTTCCTGTTCGAAGGTGATGACAATGAATTTAAGCAGGTACTGGACACCCTGGGTGAAACACCGCTGCCTAAATACATC AAGCGTAAGCCTGAAGAAGAGGATAAAGAGCGTTATCAGACAGTTTACGCAAAACATGAAGGCGCCGTTGCAGCTCCGAC TGCTGGTCTGCACTTCAGCCGTGAGCTGATCAAACGCCTGGAGATCAAAGGTGTTAAATTCGCAGAAGTTACCCTGCACA CCGGTTTAGGCACATTCCGTCCTATCGAGGTAGAAGATCTGAGCAAACACAAGATGGATGCTGAGTACTTCAACATTGAC GAGTATGCTGTGAAAGTGGTGAACAAGGCAAAAGAAGAGAACCGCAAGGTTTGTGCGATCGGTACTACCACCGTGAGAGC GGTTGAGTCTTCCGTGACTGCACAGAACCTGCTGAAAGCAGCAGAAGGATGGACAAATACCTTTATTCACCCTCCTTATG ATTTCGCTATTCCGAATGCACTGGTTACTAACTTCCACCTACCTAAAACAAGCCTCCTGATCATGGTATGTGCTTTTGCA GGTTATGATCTGGTGATGGAAGCATATCAGCAGGCTATTAAGGAGAAATACCGTTTCTTCAGCTATGGTGATGCAATGCT GATCATCTGA Protein sequence : MKLSQFRFDLPLNLIAQHPSKTRDEARLMVVNRATGKIEHKVFRDIINYFNDKDVMVVNNTKVFPARLYGRKEKTGAKIE VFLLRELNKQNRLWDVIVDPARKIRVGNKLYFGDDESLVAEVIDNTTSRGRTIRFLFEGDDNEFKQVLDTLGETPLPKYI KRKPEEEDKERYQTVYAKHEGAVAAPTAGLHFSRELIKRLEIKGVKFAEVTLHTGLGTFRPIEVEDLSKHKMDAEYFNID EYAVKVVNKAKEENRKVCAIGTTTVRAVESSVTAQNLLKAAEGWTNTFIHPPYDFAIPNALVTNFHLPKTSLLIMVCAFA GYDLVMEAYQQAIKEKYRFFSYGDAMLII |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| queA | AAT96070.1 | QueA | Not tested | T-PAI | Protein | 9e-60 | 43 |
| queA | AAT96106.1 | QueA | Not tested | T-PAI | Protein | 7e-60 | 43 |
| queA | AAF71483.1 | QueA | Not tested | Hrp PAI | Protein | 6e-62 | 43 |
| queA | AAT96122.1 | QueA | Not tested | T-PAI | Protein | 4e-62 | 43 |
| queA | AAT96182.1 | QueA | Not tested | T-PAI | Protein | 2e-59 | 43 |
| queA | AAF71490.1 | QueA | Not tested | Hrp PAI | Protein | 3e-59 | 42 |
| queA | AAT96042.1 | QueA | Not tested | T-PAI | Protein | 1e-59 | 42 |
