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Name : Cpin_1528 (Cpin_1528) Accession : YP_003121226.1 Strain : Chitinophaga pinensis DSM 2588 Genome accession: NC_013132 Putative virulence/resistance : Unknown Product : ABC transporter Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : - Position : 1872809 - 1874560 bp Length : 1752 bp Strand : + Note : PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: bba:Bd1221 ABC-type dipeptide transport system, ATPase component DNA sequence : ATGCAGCAGCCACTTTTATCCATCCGCGACCTGATGGTTTCCTTCGGCAGCACACCTGCTGTCAATGGTATTTCACTGGA TATTATGCCCGGTGAGATCGTTGGTATTGTCGGAGAATCCGGTTCCGGTAAATCAGTAACAGCCCTTTCCCTGATGCGGC TGTTGCAGCATCCCGGCCGGATCAGCGGAGGTAGTCTGCAATACCATCTGTCAGGCAGTAAAATGCCGATAACAGATATC ACACGTTTGTCTGAAATTGAAATGCGTTCCTGGCGTGGCAACGAGATTGCGATGATCTTCCAGGAACCGATGACATCCCT GAATCCGCTGCATACCTGCGGGCATCAGGTGATGGAAGCACTCTTACTCCATAAAAGATTGATGAACAGGGAAGCAGCGA GACTGCAAACCCTGGCCCTGTTTAAACAGGTACGCCTGCCTGATCCTGAGTTGATGATGGAACGTTATCCACATCAGCTT TCCGGCGGACAAAAACAAAGGGTCATGATTGCTATGGCCATCAGTTGTCAGCCCCGCCTGCTCATTGCTGACGAACCCAC CACTGCATTAGATGTCACCGTACAGAAAACGATACTTGAACTGCTGAAAGAGCTGCAACGGCAGACGGGCATGAGTGTGA TCTTTATTACGCATGACCTGGGGGTTATTGCAGAAATAGCTGACCGGGTAGCGGTGATGTATAAGGGCCGTATTGTAGAG GAAGGGAGCGTGGCACAGCTGTTCACGCATCCGCAGCATCCTTATACGAAGGGGTTGCTGGCTTGTCGTCCGCCATTAGA TAAAAGGTTGTTCCGTTTGCCCGTCACCCGCGACTTTATGGAAATAGACCCGCAGGGAGAGATCGTGGAGAAGGCGCAGG AGATAAAGGCGTTTGTACATAGTCTGGAGGTCCCGCAGGAACTGATTGCCGGCAGGGAAGCCATGCTGGCACAACGGCCG CTTTTACTGGAAGTAAAAGACCTGCATACCTGGTTTCCTGCCAGGAAGAACATCTTTGGGAAAGTCCTTTCCTGGACGAA AGCCGTCAACGGCGTCAGTTTTGACGTCAGGGAAGGGGAAACTATGGGACTTGTAGGGGAGTCCGGATGTGGAAAAACTA CACTGGGAAGAACCTTGTTAAGACTGGCAGAACCGACTTCCGGCAGTATTTACTATAAGGGGAAAGACATTACTACCTTA TCCGCAGGAGCATTGAGGGATCTGCGGAAGGATATCCAGATTATCTTCCAGGATCCCTATTCTTCCTTGAATCCACGCAT GACCATTGGTCGTGCTATTGAAGAGCCCATGAAAGTACATGGATTGTATGGTACGGAACAGGGGAGAAGGGAGCGAGTGA AGGAGCTGCTGGCAAAGGTGAACCTGTTGCCGGAGCATTATAATCGTTATCCACATGAGTTTTCCGGCGGACAAAGACAG CGTATTGTCATTGCGCGCGCATTGGCTTTGGATCCGTCTTTTATTATCTGCGACGAATCAGTAGCCGCCCTGGACGTGAG TATTCAGGCACAGGTTTTGAATCTGTTGATGCAGCTGAGGGAGGAATTCGGATTTACCAGTATATTTATTTCCCATGATC TGTCGGTGGTACGTTTTATCAGTGACAGGATGATGGTGATGAACCGGGGGCAGATTGAAGAAGCGGGACAGGCCGCTGAA GTGTATGAGCAGCCCAAAAGTGAATATACCAGACAGCTAATTAATTCTATACCGAAAAATATTTATGTGTAA Protein sequence : MQQPLLSIRDLMVSFGSTPAVNGISLDIMPGEIVGIVGESGSGKSVTALSLMRLLQHPGRISGGSLQYHLSGSKMPITDI TRLSEIEMRSWRGNEIAMIFQEPMTSLNPLHTCGHQVMEALLLHKRLMNREAARLQTLALFKQVRLPDPELMMERYPHQL SGGQKQRVMIAMAISCQPRLLIADEPTTALDVTVQKTILELLKELQRQTGMSVIFITHDLGVIAEIADRVAVMYKGRIVE EGSVAQLFTHPQHPYTKGLLACRPPLDKRLFRLPVTRDFMEIDPQGEIVEKAQEIKAFVHSLEVPQELIAGREAMLAQRP LLLEVKDLHTWFPARKNIFGKVLSWTKAVNGVSFDVREGETMGLVGESGCGKTTLGRTLLRLAEPTSGSIYYKGKDITTL SAGALRDLRKDIQIIFQDPYSSLNPRMTIGRAIEEPMKVHGLYGTEQGRRERVKELLAKVNLLPEHYNRYPHEFSGGQRQ RIVIARALALDPSFIICDESVAALDVSIQAQVLNLLMQLREEFGFTSIFISHDLSVVRFISDRMMVMNRGQIEEAGQAAE VYEQPKSEYTRQLINSIPKNIYV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 8e-101 | 42 |
