Gene Information

Name : Cpin_1435 (Cpin_1435)
Accession : YP_003121133.1
Strain : Chitinophaga pinensis DSM 2588
Genome accession: NC_013132
Putative virulence/resistance : Resistance
Product : beta-lactamase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG2367
EC number : -
Position : 1748010 - 1748897 bp
Length : 888 bp
Strand : +
Note : PFAM: beta-lactamase; KEGG: aby:ABAYE3623 beta-lactamase VEB-1

DNA sequence : 
ATGAAAAATCGTATCCTATCGTGCTCCTTAGCACTGCCGTTCCTGTTGTTAAGTATACACAGCTCCGCACAGGACAACAA
TACCAGACAAAAAGTAAATGAAATTGCTGCTACCGCCCGTGGACATGTGGGTGTGGCGATGATGTCCCTGGAAAACGGAG
ACACCATGACGCTCAACGGAAATGATCACTTCCCGATGCAGAGCGTATTTAAAGTACCCCTGGCCATCGCTGTACTGGAT
CAGGTAGATAAAGGTAAACTGTCACTTGACCAGGTGATTCATATCACGAAGAAAGAATTACTGCCTTTTACGTGGAGCCC
GATAAGAGAAAAATATCCGGAAGGAACAGACCTGAAGCTGAGAGAAGTATTGGCTTATACCGTATCGCAGAGTGATAACA
ACGGTTGTGATATTTTATTTAACCTCGTAGGTGGTACCGCTTACGTTGAACAATATATCCATGGCCTGGGTGTTGATAGC
ATGGCTATCAAGGCGAATGAAGAAAGAATGGCATCTGCATGGAAAGTACAATATACCAACTGGAGCTCACCACTGGCTAC
ATTGCAATTACTGAAAGGTATCCATACCGGAAAATACCTGTCTAAAGCCAGCAATGACTTCCTGTTGAAGATCATGAAAG
AAACGACTACTGGTCCTAAGAGACTGAGAGGCATGTTGCCTGCAGACGCGGTAGTTGCACATAAAACAGGTTCTTCTGAT
ACAAAAGACGGTTTAACTGCTGCTACCAATGATGCCGGTATTGTTACATTACCTGACGGATCACATTTAGCGATCGTTGT
TTTTGTCAGCGATACTAAGGTGAATGAAGCGATCAGAGAAGGTGTGATCGCCAGGATTACCCGCCTTTTCTGGGACGCTG
CTAACTAA

Protein sequence : 
MKNRILSCSLALPFLLLSIHSSAQDNNTRQKVNEIAATARGHVGVAMMSLENGDTMTLNGNDHFPMQSVFKVPLAIAVLD
QVDKGKLSLDQVIHITKKELLPFTWSPIREKYPEGTDLKLREVLAYTVSQSDNNGCDILFNLVGGTAYVEQYIHGLGVDS
MAIKANEERMASAWKVQYTNWSSPLATLQLLKGIHTGKYLSKASNDFLLKIMKETTTGPKRLRGMLPADAVVAHKTGSSD
TKDGLTAATNDAGIVTLPDGSHLAIVVFVSDTKVNEAIREGVIARITRLFWDAAN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
bla VEB-1 CAJ77043.1 Betalactamase Not tested AbaR1 Protein 2e-61 47
ABK1_0262 YP_005512834.1 Extended-spectrum beta-lactamase PER-1 precursor Not tested AbaR4d Protein 1e-49 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cpin_1435 YP_003121133.1 beta-lactamase EF136375.1.gene1.p01 Protein 3e-61 47
Cpin_1435 YP_003121133.1 beta-lactamase AF010416.1.gene1.p01 Protein 1e-61 47
Cpin_1435 YP_003121133.1 beta-lactamase AY027870.1.gene1.p01 Protein 1e-61 47
Cpin_1435 YP_003121133.1 beta-lactamase EF420108.1.gene1.p01 Protein 3e-61 47
Cpin_1435 YP_003121133.1 beta-lactamase AY536519.1.gene1.p01 Protein 2e-61 47
Cpin_1435 YP_003121133.1 beta-lactamase NC_010410.6002875.p0 Protein 1e-61 47
Cpin_1435 YP_003121133.1 beta-lactamase X93314.gene.p01 Protein 2e-48 45
Cpin_1435 YP_003121133.1 beta-lactamase GQ396303.1.gene1.p01 Protein 1e-48 45
Cpin_1435 YP_003121133.1 beta-lactamase AY740681.1.gene9.p01 Protein 3e-49 43
Cpin_1435 YP_003121133.1 beta-lactamase FJ627180.1.gene1.p01 Protein 2e-49 43