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Name : Cpin_1080 (Cpin_1080) Accession : YP_003120779.1 Strain : Chitinophaga pinensis DSM 2588 Genome accession: NC_013132 Putative virulence/resistance : Virulence Product : NAD-dependent epimerase/dehydratase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0451 EC number : - Position : 1295282 - 1296343 bp Length : 1062 bp Strand : + Note : PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; polysaccharide biosynthesis protein CapD; dTDP-4- dehydrorhamnose reductase; KEGG: wsu:WS0025 UDP-glucuronic acid epimerase DNA sequence : ATGAAAATATTAGTTACCGGAGCTGCTGGGTTTATTGGGTATTACGCAACAAAACGACTAGCGGAGTTGAATTTTGAAGT AGTAGGATTGGATAATATCAATGAGTATTATGATATTAATCTGAAACATGCCCGTTTAGCAGAAGCCGGTATCGATAAAA ATAAGATTGCCTACAATGAGCTTATATTAAGCGATAAATATAAGAACTACCGTTTTGTCAAATTGAACCTTGATGACCAG GAAAATCTTGCTGCGTTATTCCGCAATGAACAGTTTGATGTAGTATGTAATCTGGCCGCACAGCCGGGTGTTCGTTATTC TCTTGAAAACCCTTTTGTTTATGTCAACAGTAATGTTGTCGGGTTTATGAATATACTGGAATGCTGCAGATACAATAAAG TAAAACACCTGGTATATGCCAGCTCCAGCAGCGTATATGGTATGAGTAAAAAGGTGCCGTTTGAAGAAACGGACAATGTT GACAATCCGGTTAGCTTGTATGCTGCTACAAAGAAAGCAAACGAACTGTTCGCACATACATATAGTCACCTGTACGGATT GAAAACAACAGGTCTGCGCTTCTTTACGGTATATGGTCCCTGGGGTCGTCCGGATATGGCGCCGTTCCTGTTTACCAATG CCATTCTGAAAGGAGAAGCGATCAAGGTATTTAACAACGGAGAGTTGTCGCGTGACTTTACCTATGTGGATGATGTGGTA GAAGGTGTGATCAGGGTGATTATGCTGCCTGATAATGAGAAAGAGCAGAAGGACAGCGGAGAAGCACAGGGTGAGTTTTC AGGATTGTATAAAATCTTTAATATAGGGAATTCATCGCCTGTTCAGCTGATGGACTTTATCAGATGCATAGAAAAGGCGA CAGGTAAGGAAGCTATCCTGAAGATGTTGCCGATGCAACCGGGAGATGTTGTTTCGACTTATGCTGACACAAGTGAATTA GCTGCTTATGTTAACTATAGACCATCTACCCCTCTTCAGGACGGAATAGACAGATTTGTATCCTGGTTTAAGGAGTATTC TTCGAAAGCACATCAATATTAA Protein sequence : MKILVTGAAGFIGYYATKRLAELNFEVVGLDNINEYYDINLKHARLAEAGIDKNKIAYNELILSDKYKNYRFVKLNLDDQ ENLAALFRNEQFDVVCNLAAQPGVRYSLENPFVYVNSNVVGFMNILECCRYNKVKHLVYASSSSVYGMSKKVPFEETDNV DNPVSLYAATKKANELFAHTYSHLYGLKTTGLRFFTVYGPWGRPDMAPFLFTNAILKGEAIKVFNNGELSRDFTYVDDVV EGVIRVIMLPDNEKEQKDSGEAQGEFSGLYKIFNIGNSSPVQLMDFIRCIEKATGKEAILKMLPMQPGDVVSTYADTSEL AAYVNYRPSTPLQDGIDRFVSWFKEYSSKAHQY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1I | AAA64648.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-85 | 51 |
